Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC103858.2-201ENST00000621471 543 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 AL445363.3-201ENST00000623080 671 ntBASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSX2IPQ9Y2D8 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 RPL23AP57-201ENST00000332361 466 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 RNA5SP130-201ENST00000364431 114 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 RNU6-1293P-201ENST00000384077 107 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 MIR554-201ENST00000384874 96 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 EIF5P1-201ENST00000400019 1231 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 RN7SKP167-201ENST00000411047 285 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 Z97055.1-201ENST00000419730 712 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC244505.5-201ENST00000443639 207 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 NPM1P49-201ENST00000448027 714 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 SNORA84-201ENST00000459229 133 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AP000926.1-201ENST00000479573 241 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 RN7SL604P-201ENST00000492589 296 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC090453.1-201ENST00000495560 436 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC024589.1-201ENST00000512207 263 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC022878.1-201ENST00000530684 149 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 MIR4504-201ENST00000577413 92 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AL022154.1-201ENST00000604698 785 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC126118.1-201ENST00000607744 628 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC131902.3-201ENST00000611767 581 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AC025588.4-201ENST00000615802 908 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 MIR6864-201ENST00000617935 70 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 RNU6-156P-201ENST00000621869 107 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 AL161912.2-201ENST00000565707 3007 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSX2IPQ9Y2D8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 XIAPP3-201ENST00000312918 795 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 OR11H4-201ENST00000315409 1082 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 RNU1-44P-201ENST00000384453 163 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 RNU6-297P-201ENST00000384636 107 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 ARF4P3-201ENST00000397387 509 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 RPL21P65-201ENST00000406094 466 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 RN7SKP159-201ENST00000410657 292 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 RNU6-248P-201ENST00000410720 107 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 OR8G2P-201ENST00000412796 908 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 TPMTP2-201ENST00000414372 726 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 HMGB3P23-201ENST00000414981 585 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 RBMY1KP-201ENST00000423480 476 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 OR8F1P-201ENST00000425243 930 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 AL138785.1-201ENST00000425821 331 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 MTND3P21-201ENST00000433774 331 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 MTND5P14-201ENST00000441481 1267 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 GDI2P2-201ENST00000445131 608 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 AC093392.2-201ENST00000450682 337 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 OR6K1P-201ENST00000456766 971 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 AL358832.1-201ENST00000497800 389 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 FTH1P9-201ENST00000513251 355 ntBASIC4.5□□□□□ -1.69
SSX2IPQ9Y2D8 IGLV3-26-201ENST00000520756 302 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms