Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 SOCS5P3-201ENST00000425115 1576 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 AL138713.1-201ENST00000624026 2130 ntBASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ZC3H4Q9UPT8 RNU6-188P-201ENST00000364207 107 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 U3.10-201ENST00000364459 214 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 SNORD115-7-201ENST00000365306 82 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 Y_RNA.576-201ENST00000384781 102 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 SNORA68.2-201ENST00000391263 128 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 AL391417.1-201ENST00000404100 426 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 AL359643.1-201ENST00000404109 423 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 AL354868.1-201ENST00000417077 482 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 NRBF2P3-201ENST00000432731 865 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 RPL7P28-201ENST00000437739 740 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 KNOP1P3-201ENST00000446933 426 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 GSTA11P-201ENST00000452866 669 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 RPS20P21-201ENST00000466859 343 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 AC010683.1-201ENST00000473673 378 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 AC026979.1-201ENST00000492525 396 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 AC104564.1-201ENST00000493028 407 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 AC079140.5-201ENST00000507882 310 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 OR7H2P-201ENST00000513483 306 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 AC110743.1-201ENST00000584870 478 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 PRR13P7-201ENST00000605538 430 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 ATP5A1P2-202ENST00000616464 443 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 AL357559.1-201ENST00000622228 274 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 ZNF519P1-201ENST00000449011 1626 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 Z95114.1-201ENST00000624264 14574 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 AL592148.3-201ENST00000608771 2646 ntBASIC6.51□□□□□ -1.37
ZC3H4Q9UPT8 RNA5SP391-201ENST00000363456 119 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 Y_RNA.252-201ENST00000364556 101 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AL360182.1-201ENST00000397433 468 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 DBIP1-201ENST00000401435 260 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 RNU4-6P-201ENST00000410804 122 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 RNU4-61P-201ENST00000411243 107 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 HNRNPDLP1-201ENST00000412834 550 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AC114491.1-201ENST00000416095 246 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 RPL17P36-201ENST00000420302 549 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AC093151.1-201ENST00000427711 313 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AL669831.1-202ENST00000428504 417 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 EEF1A1P1-201ENST00000447052 739 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 CEACAMP4-201ENST00000457676 421 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 TRBV1-201ENST00000476502 284 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AC104057.1-201ENST00000515547 497 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 RN7SKP260-201ENST00000516907 149 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 MIR4691-201ENST00000583764 85 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 FAM157A-202ENST00000615155 405 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AC055839.1-201ENST00000634467 498 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AL022323.4-201ENST00000623980 13120 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 NXPH1-205ENST00000602349 1953 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 AC093671.1-201ENST00000624981 2929 ntBASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ZC3H4Q9UPT8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms