Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 uc_338.11-201ENST00000619132 160 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC011155.2-201ENST00000623202 216 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC008013.2-202ENST00000637965 364 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 ZNF807-201ENST00000328088 1707 ntBASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
AP4E1Q9UPM8 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AC092376.2-201ENST00000622621 4116 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AC244517.1-201ENST00000606030 2086 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 MUC2-202ENST00000613187 4845 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 SNORA17.1-201ENST00000362945 126 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 RNU6-310P-201ENST00000384655 107 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AC092642.1-201ENST00000392417 425 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 MIR1302-3-201ENST00000408128 138 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AC234779.1-201ENST00000425910 285 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 COX6CP15-201ENST00000426313 211 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 RPL21P133-201ENST00000443666 476 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 RPS27P27-201ENST00000498779 255 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AL161670.1-201ENST00000554348 137 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 MIR4504-201ENST00000577413 92 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AC069061.3-201ENST00000582254 823 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AP005432.2-201ENST00000608162 586 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 AC133104.2-201ENST00000615272 193 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 MIR6729-201ENST00000618194 65 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
AP4E1Q9UPM8 PABPC1P6-201ENST00000445594 1829 ntBASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 PANDAR-201ENST00000629595 1506 ntBASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 Y_RNA.188-201ENST00000363952 111 ntBASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 RNU6-82P-201ENST00000363970 107 ntBASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 RNU6-601P-201ENST00000384540 107 ntBASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 MIR92A2-201ENST00000385299 75 ntBASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 AL359643.1-201ENST00000404109 423 ntBASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 AL035079.1-201ENST00000405210 287 ntBASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 RN7SKP126-201ENST00000411143 300 ntBASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 HMGN2P27-201ENST00000427352 270 ntBASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 AC104058.1-201ENST00000448028 297 ntBASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 AC004801.2-202ENST00000463559 283 ntBASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 RPS26P39-201ENST00000469206 341 ntBASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 AL139099.1-201ENST00000497398 403 ntBASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.34□□□□□ -1.55
AP4E1Q9UPM8 RPS27AP18-201ENST00000515536 459 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms