Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AP003033.1-201ENST00000527244 415 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 AC022878.1-201ENST00000530684 149 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL20A1Q9P218 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.49□□□□□ -1.69
COL20A1Q9P218 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.49□□□□□ -1.69
COL20A1Q9P218 CYP4A43P-201ENST00000568156 121 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.49□□□□□ -1.69
COL20A1Q9P218 AC087499.8-201ENST00000578406 226 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.49□□□□□ -1.69
COL20A1Q9P218 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.49□□□□□ -1.69
COL20A1Q9P218 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL20A1Q9P218 AC006329.2-201ENST00000611491 394 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 AC131238.1-201ENST00000617135 328 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 AC138932.5-201ENST00000617759 563 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 AP006248.2-201ENST00000623309 592 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL20A1Q9P218 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL20A1Q9P218 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.49□□□□□ -1.69
COL20A1Q9P218 NMD3P1-201ENST00000439704 1488 ntBASIC4.49□□□□□ -1.69
COL20A1Q9P218 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL20A1Q9P218 RNU6-853P-201ENST00000364306 107 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 SNORA73.2-201ENST00000364946 201 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL20A1Q9P218 U1.1-201ENST00000384101 164 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 U3.29-201ENST00000391296 212 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 RNA5SP146-201ENST00000410743 123 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 USP9YP13-201ENST00000417797 480 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL20A1Q9P218 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 EZH2P1-201ENST00000431167 291 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 Z74696.2-201ENST00000436514 498 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 NOTCH2P1-201ENST00000443481 624 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 AL590365.1-201ENST00000450788 243 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 NANOGP10-201ENST00000453325 895 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 BTF3P5-201ENST00000457252 467 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 RPS4XP10-201ENST00000465034 731 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 RPL7P24-201ENST00000493052 752 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 AP002812.1-201ENST00000495378 474 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 AL139099.1-201ENST00000497398 403 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 COX7A2P2-201ENST00000505291 250 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 AC109464.2-201ENST00000510242 943 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 CDC42P4-201ENST00000510507 563 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 RNU6-1003P-201ENST00000517099 105 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL20A1Q9P218 AC007991.1-201ENST00000522680 631 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 AL391156.1-201ENST00000554965 554 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 AC068790.6-201ENST00000602558 258 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 SEPT7P9-203ENST00000604116 343 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 AC112191.3-201ENST00000604371 277 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 AL359999.1-201ENST00000604513 294 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 AC015540.1-201ENST00000615828 501 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 AL359740.1-201ENST00000624340 592 ntBASIC4.48□□□□□ -1.69
COL20A1Q9P218 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL20A1Q9P218 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.48□□□□□ -1.69
COL20A1Q9P218 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL20A1Q9P218 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL20A1Q9P218 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL20A1Q9P218 SNORD51-201ENST00000384320 80 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 Y_RNA.493-201ENST00000384422 102 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 SNORA40.3-201ENST00000390964 122 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 RNU6-821P-201ENST00000390995 107 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 RNU6-192P-201ENST00000391253 100 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 RN7SKP156-201ENST00000410308 342 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 RAB9AP3-201ENST00000412737 573 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 NANOGP6-201ENST00000429190 847 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 AC018644.1-201ENST00000429934 551 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.47□□□□□ -1.69
COL20A1Q9P218 GOT2P5-201ENST00000433995 546 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 CKS1BP5-201ENST00000434172 273 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 RPL22P17-201ENST00000438729 315 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 FAM103A2P-201ENST00000444122 354 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 RAB9AP1-201ENST00000449393 573 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 MTCO1P42-201ENST00000457379 726 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 snoU109.4-201ENST00000458953 143 ntBASIC4.47□□□□□ -1.69
COL20A1Q9P218 RPS26P28-201ENST00000470806 348 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms