Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 AC010266.2-201ENST00000564741 3255 ntBASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CUEDC1Q9NWM3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
CUEDC1Q9NWM3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
CUEDC1Q9NWM3 AC092070.2-203ENST00000598377 3644 ntBASIC5.84□□□□□ -1.48
CUEDC1Q9NWM3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 DDX18P3-201ENST00000404856 2007 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 RNU4-44P-201ENST00000363050 141 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 MT-TC-201ENST00000387405 66 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 MIR937-201ENST00000401271 86 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 MYL8P-204ENST00000431574 518 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 RAC1P7-201ENST00000445367 377 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AC016027.4-201ENST00000450866 277 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AL139109.1-201ENST00000455491 297 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 RNU7-59P-201ENST00000459101 61 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 FTH1P2-201ENST00000466086 412 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 RN7SKP238-201ENST00000516483 249 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 DYNLL1P4-201ENST00000549314 266 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AC026371.1-201ENST00000551867 419 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AC015720.2-201ENST00000567709 334 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AC006272.2-201ENST00000594725 163 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 uc_338.26-201ENST00000612659 160 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 MIR6730-201ENST00000622213 67 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 AC091925.2-201ENST00000625059 256 ntBASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CUEDC1Q9NWM3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 MIR335-201ENST00000362173 94 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 Y_RNA.81-201ENST00000362997 102 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 RNU6-740P-201ENST00000364734 105 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 RNU5E-6P-201ENST00000365574 115 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 RNU6-1027P-201ENST00000383998 107 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 AL445189.1-201ENST00000405722 338 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 RNU6-1140P-201ENST00000410517 106 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 RN7SKP126-201ENST00000411143 300 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 AC245096.1-201ENST00000413104 546 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 AC108032.1-201ENST00000416706 207 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 RPL23AP60-201ENST00000450011 454 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 RNU7-167P-201ENST00000459160 62 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 RN7SL352P-201ENST00000466002 277 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 AC098847.1-201ENST00000473094 348 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 SNRPCP3-201ENST00000474888 476 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 AC096745.1-201ENST00000509945 370 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 MIR3176-201ENST00000582210 90 ntBASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CUEDC1Q9NWM3 AC010620.2-201ENST00000600135 313 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms