Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RPS3AP9-201ENST00000417027 792 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 OFD1P18Y-201ENST00000420889 959 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AC096632.1-201ENST00000427395 310 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AL929288.2-201ENST00000446368 407 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AL034418.1-201ENST00000448675 860 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AC112492.1-201ENST00000449607 712 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 NIPA2P5-201ENST00000452282 464 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AL590639.1-201ENST00000456484 337 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 RPS29P26-201ENST00000477483 171 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 DYNLL1P6-201ENST00000503440 264 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AC083906.5-201ENST00000503722 328 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 RN7SKP57-201ENST00000517248 293 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AL157394.1-201ENST00000562983 1224 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 COX6CP3-201ENST00000580869 223 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 DPRXP5-201ENST00000604662 539 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AC106791.2-201ENST00000604680 391 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AC013468.1-201ENST00000608680 598 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AL442067.2-201ENST00000614033 363 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AL354696.1-201ENST00000614652 497 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 ATP5A1P2-202ENST00000616464 443 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AC006213.5-201ENST00000619673 288 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AP000676.4-201ENST00000624659 623 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AL645568.2-201ENST00000432815 1337 ntBASIC2.85□□□□□ -1.95
TREX1Q9NSU2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TREX1Q9NSU2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.84□□□□□ -1.95
TREX1Q9NSU2 AC092593.1-201ENST00000515413 1815 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 MAPK10-322ENST00000641485 4530 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TREX1Q9NSU2 MIR16-2-201ENST00000362117 81 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 MIR887-201ENST00000401258 79 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TREX1Q9NSU2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.84□□□□□ -1.95
TREX1Q9NSU2 USP9YP36-201ENST00000424581 829 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 AL139132.1-201ENST00000431587 344 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.84□□□□□ -1.95
TREX1Q9NSU2 RPL21P2-201ENST00000440049 481 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.84□□□□□ -1.95
TREX1Q9NSU2 RPL21P18-201ENST00000469899 480 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 AC003982.1-202ENST00000469928 248 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.84□□□□□ -1.95
TREX1Q9NSU2 RNA5SP341-201ENST00000516261 117 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 SCARNA13-201ENST00000516672 275 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 IGJP1-201ENST00000522682 475 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.84□□□□□ -1.95
TREX1Q9NSU2 MIR5195-201ENST00000583555 115 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 AL669831.4-202ENST00000590817 238 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.84□□□□□ -1.95
TREX1Q9NSU2 AL355812.1-201ENST00000603215 216 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 AC016542.1-201ENST00000608259 493 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 AC106730.3-201ENST00000624568 641 ntBASIC2.84□□□□□ -1.95
TREX1Q9NSU2 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TREX1Q9NSU2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.84□□□□□ -1.95
TREX1Q9NSU2 AC008432.1-201ENST00000615912 1320 ntBASIC2.84□□□□□ -1.96
TREX1Q9NSU2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
TREX1Q9NSU2 MTCO1P6-201ENST00000481192 1384 ntBASIC2.84□□□□□ -1.96
TREX1Q9NSU2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.84□□□□□ -1.96
TREX1Q9NSU2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.83□□□□□ -1.96
TREX1Q9NSU2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
TREX1Q9NSU2 SNORD46.1-201ENST00000364139 104 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
TREX1Q9NSU2 RNU4-27P-201ENST00000410889 139 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AL121882.1-201ENST00000422893 417 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 RPP40P1-201ENST00000426762 456 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AC073508.1-201ENST00000428866 656 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AL513043.1-201ENST00000439124 535 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 RPL23AP58-201ENST00000440453 469 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AC104978.1-201ENST00000449387 391 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 RPL7P55-201ENST00000450522 746 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 HMGN3P1-201ENST00000453847 193 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AC010374.2-201ENST00000512933 535 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 SCGB1D5P-201ENST00000515134 247 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 HMGB1P1-201ENST00000522557 636 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AC007536.1-201ENST00000533382 349 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.83□□□□□ -1.96
TREX1Q9NSU2 MIR4325-201ENST00000583049 90 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AL513477.2-201ENST00000607858 568 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AC107871.2-201ENST00000612894 502 ntBASIC2.83□□□□□ -1.96
TREX1Q9NSU2 AC231759.1-201ENST00000616455 597 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms