Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RPL21P6-201ENST00000479171 504 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC010350.1-201ENST00000504908 231 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 HMGB3P15-201ENST00000507326 574 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 FAM206BP-201ENST00000510179 541 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 Y_RNA.682-201ENST00000516457 100 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RN7SKP219-201ENST00000516825 296 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RN7SKP260-201ENST00000516907 149 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 MYL12AP1-201ENST00000518490 515 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC105031.1-201ENST00000518550 476 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 HMGN2P6-201ENST00000551091 273 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RPL21P12-201ENST00000559810 515 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC105224.1-201ENST00000587055 421 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 CTHRC1P1-201ENST00000605383 469 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC004908.2-201ENST00000609090 574 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AL031666.3-201ENST00000609320 1006 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC130324.3-201ENST00000614165 542 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AL122125.1-201ENST00000616999 600 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AL132822.1-201ENST00000617063 513 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC090510.2-201ENST00000617465 629 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 7SK.10-201ENST00000621414 298 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RNU6-156P-201ENST00000621869 107 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC073869.10-201ENST00000642016 354 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 AC015813.6-201ENST00000624409 5808 ntBASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SEC61A2Q9H9S3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AC126323.6-202ENST00000568092 3511 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 MAPK10-349ENST00000641767 3661 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 Y_RNA.301-201ENST00000364990 103 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 RNU6-639P-201ENST00000384074 107 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 SNORA70.10-201ENST00000384515 134 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 U3.20-201ENST00000390909 217 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 MTCYBP4-201ENST00000401524 249 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 RN7SKP16-201ENST00000410180 299 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 BX323845.1-201ENST00000432417 179 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 MTATP6P16-201ENST00000434543 526 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 FTH1P1-201ENST00000437933 532 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AC104073.1-201ENST00000451988 151 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 Y_RNA.635-201ENST00000459041 101 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 RPL7L1P8-201ENST00000469911 741 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AC012181.1-201ENST00000479895 423 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AC093767.1-201ENST00000504523 156 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AC004980.4-201ENST00000513375 203 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 OR5BN1P-201ENST00000532955 829 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AC018552.1-201ENST00000562099 811 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AC245389.1-201ENST00000605141 529 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AL022345.1-201ENST00000607292 135 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AL627230.1-201ENST00000613077 211 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 MIR7155-201ENST00000615925 56 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 uc_338.12-201ENST00000616344 181 ntBASIC4.47□□□□□ -1.69
SEC61A2Q9H9S3 AL591926.8-201ENST00000616876 211 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms