Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 RPL36AP53-201ENST00000432891 316 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 Z92846.1-201ENST00000456203 268 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 PMCHL2-203ENST00000457791 237 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AC092754.1-201ENST00000472975 479 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 RPL23AP11-201ENST00000475260 469 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AP000926.1-201ENST00000479573 241 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 SNORA31.8-201ENST00000516327 108 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 OR5D15P-201ENST00000531671 942 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AP004242.1-201ENST00000533701 349 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 MED28P6-201ENST00000558776 231 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 MIR3691-201ENST00000578066 90 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AC010632.3-201ENST00000611377 369 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AC012409.4-201ENST00000612923 249 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AC104260.1-201ENST00000616660 539 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AC010338.1-201ENST00000621823 717 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 C2orf27A-204ENST00000623058 969 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AP002799.1-201ENST00000623552 423 ntBASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRAIPQ9BWF2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 RNU6-817P-201ENST00000391083 104 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 RN7SKP177-201ENST00000410567 355 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 RPL27AP8-201ENST00000424277 446 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 NDUFB4P8-201ENST00000435351 367 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 PSMD10P3-201ENST00000437000 448 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 RPL5P25-201ENST00000441148 775 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 AC073850.1-201ENST00000449243 255 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 MTND3P16-201ENST00000452205 344 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 AP000873.1-201ENST00000463987 400 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 RPL21P99-201ENST00000480369 423 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 AC091912.1-201ENST00000511351 248 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 AP000676.2-201ENST00000529711 301 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 AC106782.4-201ENST00000568264 210 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 MIR7853-201ENST00000584820 132 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 DPPA3P3-201ENST00000603842 430 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 AL035413.2-201ENST00000604801 525 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 AL354685.2-201ENST00000448218 1447 ntBASIC5.82□□□□□ -1.48
TRAIPQ9BWF2 TPTE2P4-201ENST00000258589 1605 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 AC007390.2-201ENST00000606229 3803 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 RNU6-600P-201ENST00000362524 99 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 Y_RNA.231-201ENST00000364358 102 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 RNU6-332P-201ENST00000391193 108 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 AL109941.1-201ENST00000401925 229 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 RNU4-26P-201ENST00000410270 107 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 AL513331.1-201ENST00000411908 397 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 RPL7P46-201ENST00000425129 740 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 AL590383.1-201ENST00000428602 75 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 ERLEC1P1-201ENST00000433806 578 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 USP9YP8-201ENST00000441913 500 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 AP000852.1-201ENST00000472460 573 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 RPS18P6-201ENST00000476880 458 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 MRPS33P2-201ENST00000507850 322 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 RNU6-123P-201ENST00000516163 102 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 Y_RNA.689-201ENST00000516589 107 ntBASIC5.81□□□□□ -1.48
TRAIPQ9BWF2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms