Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS50Q96JG6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VPS50Q96JG6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.25□□□□□ -1.73
VPS50Q96JG6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
VPS50Q96JG6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS50Q96JG6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS50Q96JG6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS50Q96JG6 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS50Q96JG6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 AC021146.4-201ENST00000309229 279 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 RN7SKP226-201ENST00000364912 300 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 RNU6-356P-201ENST00000384140 107 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 Y_RNA.582-201ENST00000391023 95 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS50Q96JG6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS50Q96JG6 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 AC011933.1-201ENST00000413334 321 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 OR8F1P-201ENST00000425243 930 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 OR51AB1P-201ENST00000429046 620 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 AC091390.1-201ENST00000433904 331 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 DNAJC19P4-201ENST00000440115 345 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 RPL23AP93-201ENST00000440847 484 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 SNRPFP4-201ENST00000456366 242 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 snoU109.1-201ENST00000459339 135 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 AC116533.1-201ENST00000459748 321 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 AP001992.1-205ENST00000462248 379 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 AP001025.2-201ENST00000490908 477 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 AC023424.2-201ENST00000493479 777 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 RN7SL812P-201ENST00000493791 279 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 FTH1P9-201ENST00000513251 355 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 AC093853.1-201ENST00000515689 483 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 HIGD1AP3-201ENST00000515857 278 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 SNORA18.6-201ENST00000516792 115 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 AC087883.1-201ENST00000551882 391 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 RPL21P5-201ENST00000554662 472 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 CENPUP2-201ENST00000555897 1186 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 HMGN1P30-201ENST00000589286 268 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 AC007566.2-201ENST00000603642 413 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS50Q96JG6 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS50Q96JG6 MIR6716-201ENST00000613413 80 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 AP001506.1-201ENST00000615444 211 ntBASIC4.24□□□□□ -1.73
VPS50Q96JG6 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS50Q96JG6 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VPS50Q96JG6 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
VPS50Q96JG6 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS50Q96JG6 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS50Q96JG6 NOL8P1-201ENST00000508336 3529 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 SNORA70E-201ENST00000384492 135 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 Y_RNA.548-201ENST00000384656 105 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 RNU6-195P-201ENST00000411352 109 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 RPL31P2-201ENST00000413849 377 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VPS50Q96JG6 RPEP3-201ENST00000425462 676 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 RPEP2-201ENST00000432149 701 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 MTND6P13-201ENST00000443510 523 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 GAPDHP17-201ENST00000449858 1001 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 AC011276.1-201ENST00000469688 323 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 AC087312.1-201ENST00000471411 480 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 TMED11P-201ENST00000479478 690 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 AC026979.1-201ENST00000492525 396 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 AC112204.1-201ENST00000502591 103 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
VPS50Q96JG6 RN7SKP122-201ENST00000515923 296 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.23□□□□□ -1.73
VPS50Q96JG6 RNU6-1003P-201ENST00000517099 105 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms