Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 RNA5SP497-201ENST00000516081 97 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 RNA5SP249-201ENST00000516127 99 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 RNU6-123P-201ENST00000516163 102 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 RNA5SP315-201ENST00000516340 116 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 RNA5SP312-201ENST00000517068 116 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 AP003730.1-201ENST00000524605 285 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC239860.2-201ENST00000525886 270 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 AL161713.1-201ENST00000555538 145 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 GTF2IP8-201ENST00000560687 584 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC136618.2-201ENST00000575091 400 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC009977.1-201ENST00000586015 570 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC018638.8-201ENST00000588755 281 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC022916.3-201ENST00000592961 742 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 BNIP3P23-201ENST00000599655 511 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 RNF138P2-201ENST00000603490 592 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 AL391646.1-201ENST00000603860 190 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 BNIP3P4-201ENST00000604946 565 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC023043.4-201ENST00000612081 449 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC108479.2-201ENST00000617314 601 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 AL161637.1-201ENST00000622380 412 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHFRQ96EP1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHFRQ96EP1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHFRQ96EP1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CHFRQ96EP1 SEC63P2-201ENST00000503863 1939 ntBASIC4.62□□□□□ -1.67
CHFRQ96EP1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHFRQ96EP1 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHFRQ96EP1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.61□□□□□ -1.67
CHFRQ96EP1 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHFRQ96EP1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CHFRQ96EP1 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHFRQ96EP1 RNF6P1-201ENST00000444889 1784 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHFRQ96EP1 RNU6-474P-201ENST00000384243 107 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 RNU6-784P-201ENST00000384330 106 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 RNU6-185P-201ENST00000384421 107 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 RNU1-13P-201ENST00000384499 162 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 MIR134-201ENST00000385258 73 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 RPL32P23-201ENST00000397237 405 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 OR1AA1P-201ENST00000419597 916 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.61□□□□□ -1.67
CHFRQ96EP1 AL591212.2-201ENST00000433923 257 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 AC079448.1-201ENST00000449377 373 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 AC022795.1-201ENST00000473808 480 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 RPL7P38-201ENST00000488396 739 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 KCTD9P5-201ENST00000504141 1170 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.61□□□□□ -1.67
CHFRQ96EP1 CCDC34P1-201ENST00000507441 517 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 RPL7L1P13-201ENST00000511702 739 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.61□□□□□ -1.67
CHFRQ96EP1 RN7SKP116-201ENST00000516902 319 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 RNU6-794P-201ENST00000517261 64 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 AC083923.1-201ENST00000523708 376 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.61□□□□□ -1.67
CHFRQ96EP1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.61□□□□□ -1.67
CHFRQ96EP1 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.61□□□□□ -1.67
CHFRQ96EP1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.61□□□□□ -1.67
CHFRQ96EP1 AC106785.1-201ENST00000565935 262 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 AC093249.1-201ENST00000567049 203 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 VN1R85P-201ENST00000601587 426 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 RNU6-88P-201ENST00000606801 100 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 MIR7973-1-201ENST00000614683 76 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CHFRQ96EP1 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.61□□□□□ -1.67
CHFRQ96EP1 MIR3653-201ENST00000625572 110 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.61□□□□□ -1.67
CHFRQ96EP1 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHFRQ96EP1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHFRQ96EP1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CHFRQ96EP1 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
CHFRQ96EP1 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CHFRQ96EP1 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHFRQ96EP1 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHFRQ96EP1 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CHFRQ96EP1 AL139811.1-201ENST00000424779 2299 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 AC126323.6-202ENST00000568092 3511 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 OR5P1P-201ENST00000299512 925 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 RNY3P3-201ENST00000363816 102 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 Y_RNA.459-201ENST00000384251 102 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 RNU6-331P-201ENST00000384724 107 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.6□□□□□ -1.67
CHFRQ96EP1 AL353678.1-201ENST00000422735 741 ntBASIC4.6□□□□□ -1.67
CHFRQ96EP1 CKS1BP6-201ENST00000424932 240 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms