Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL359265.2-201ENST00000434367 631 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 UBE2V1P13-201ENST00000436983 439 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.12□□□□□ -1.59
DDX1Q92499 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.12□□□□□ -1.59
DDX1Q92499 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.12□□□□□ -1.59
DDX1Q92499 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.12□□□□□ -1.59
DDX1Q92499 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.12□□□□□ -1.59
DDX1Q92499 RPS20P20-201ENST00000460498 340 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 RPL7P15-201ENST00000461190 712 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.12□□□□□ -1.59
DDX1Q92499 COX7A2P2-201ENST00000505291 250 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.12□□□□□ -1.59
DDX1Q92499 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.12□□□□□ -1.59
DDX1Q92499 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.12□□□□□ -1.59
DDX1Q92499 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.12□□□□□ -1.59
DDX1Q92499 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.12□□□□□ -1.59
DDX1Q92499 AC105029.1-201ENST00000520250 669 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.12□□□□□ -1.59
DDX1Q92499 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.12□□□□□ -1.59
DDX1Q92499 AL121821.2-201ENST00000556081 394 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.12□□□□□ -1.59
DDX1Q92499 MIR5699-201ENST00000578903 90 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 MIR4472-2-201ENST00000582069 67 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 MIR3936-201ENST00000584304 110 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 AC011712.1-201ENST00000588959 234 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 AL136363.1-201ENST00000605349 337 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 AC091905.1-201ENST00000624400 311 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.12□□□□□ -1.59
DDX1Q92499 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
DDX1Q92499 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
DDX1Q92499 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
DDX1Q92499 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.12□□□□□ -1.59
DDX1Q92499 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
DDX1Q92499 AL359893.1-201ENST00000447628 1580 ntBASIC5.12□□□□□ -1.59
DDX1Q92499 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
DDX1Q92499 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DDX1Q92499 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DDX1Q92499 AL731566.1-201ENST00000620490 1937 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
DDX1Q92499 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
DDX1Q92499 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DDX1Q92499 UBBP2-201ENST00000376781 231 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 MIR606-201ENST00000384851 96 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 RNA5SP118-201ENST00000410385 109 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX1Q92499 CYP4F29P-201ENST00000420685 446 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 OR2B7P-201ENST00000429302 934 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX1Q92499 AC002486.1-201ENST00000435098 391 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.11□□□□□ -1.59
DDX1Q92499 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.11□□□□□ -1.59
DDX1Q92499 AC004938.1-201ENST00000438468 308 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX1Q92499 MRPL48P1-201ENST00000445390 636 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 TDGF1P1-201ENST00000445734 527 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 AC140076.1-201ENST00000449897 361 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.11□□□□□ -1.59
DDX1Q92499 AURKAPS2-201ENST00000454983 333 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 C1DP4-201ENST00000455429 424 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
DDX1Q92499 AC023424.1-201ENST00000496058 459 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 RNU6-513P-201ENST00000516104 104 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 Y_RNA.672-201ENST00000516289 104 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 RNU2-46P-201ENST00000517038 113 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX1Q92499 TRMT10BP1-201ENST00000519377 943 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.11□□□□□ -1.59
DDX1Q92499 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.11□□□□□ -1.59
DDX1Q92499 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX1Q92499 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.11□□□□□ -1.59
DDX1Q92499 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.11□□□□□ -1.59
DDX1Q92499 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX1Q92499 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX1Q92499 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.11□□□□□ -1.59
DDX1Q92499 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX1Q92499 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.11□□□□□ -1.59
DDX1Q92499 AC022726.1-201ENST00000587475 207 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 AC018638.8-201ENST00000588755 281 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 HMGN1P30-201ENST00000589286 268 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.11□□□□□ -1.59
DDX1Q92499 AL512782.1-201ENST00000603093 364 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 MIR7703-201ENST00000620784 77 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 AP000843.1-201ENST00000624880 701 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 AC068724.3-201ENST00000625906 87 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 MIR6830-201ENST00000636015 70 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
DDX1Q92499 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
DDX1Q92499 AL672167.1-205ENST00000641112 3080 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
DDX1Q92499 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
DDX1Q92499 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
DDX1Q92499 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.11□□□□□ -1.59
DDX1Q92499 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
DDX1Q92499 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DDX1Q92499 AL049555.1-201ENST00000562834 1933 ntBASIC5.11□□□□□ -1.59
DDX1Q92499 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
DDX1Q92499 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms