Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNED1Q8TER0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNED1Q8TER0 AC018529.3-201ENST00000624212 2254 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNED1Q8TER0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNED1Q8TER0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNED1Q8TER0 NEAT1-202ENST00000501122 22743 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 AC025263.3-201ENST00000622965 1396 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 AC025125.1-201ENST00000624743 1922 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 OR5BR1P-201ENST00000524992 1330 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 RNU6-452P-201ENST00000384406 107 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 MIR708-201ENST00000390708 88 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 ARF4P3-201ENST00000397387 509 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 AC011233.1-201ENST00000422812 283 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 AL513174.1-201ENST00000423182 629 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 HMGB3P6-201ENST00000444896 598 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 RPS27AP8-201ENST00000452665 445 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 RNU7-125P-201ENST00000458760 62 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 MTND3P7-201ENST00000474435 343 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 AC104417.1-201ENST00000523974 751 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 AC015917.1-201ENST00000579654 510 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 AC004987.4-201ENST00000603383 338 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 MTND3P19-201ENST00000603825 345 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 AC107304.1-201ENST00000604229 296 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 AL138478.1-201ENST00000612252 832 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 AC024257.5-201ENST00000612739 531 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 RMST_9.1-201ENST00000619945 193 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 AC091931.1-201ENST00000623488 728 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 AC007490.1-201ENST00000624321 703 ntBASIC3.86□□□□□ -1.79
SNED1Q8TER0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.86□□□□□ -1.79
SNED1Q8TER0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNED1Q8TER0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.85□□□□□ -1.79
SNED1Q8TER0 AL133412.1-201ENST00000380194 2992 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SNED1Q8TER0 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNED1Q8TER0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNED1Q8TER0 AL356473.1-201ENST00000406203 1408 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNED1Q8TER0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.85□□□□□ -1.79
SNED1Q8TER0 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNED1Q8TER0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.85□□□□□ -1.79
SNED1Q8TER0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SNED1Q8TER0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNED1Q8TER0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SNED1Q8TER0 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SNED1Q8TER0 FTLP6-201ENST00000355274 422 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 SNORD113-6-201ENST00000363345 75 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 SNORD56.4-201ENST00000363883 71 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 RNU6-236P-201ENST00000363886 106 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.85□□□□□ -1.79
SNED1Q8TER0 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.85□□□□□ -1.79
SNED1Q8TER0 AL356320.2-201ENST00000417263 507 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 AL139281.1-201ENST00000422120 335 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 NANOGP2-201ENST00000435391 727 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 MTCYBP39-201ENST00000437562 491 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 AC016696.1-201ENST00000446949 318 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 TRBV8-2-201ENST00000475637 270 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 AC108734.3-201ENST00000481241 1165 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 AC111193.1-201ENST00000504097 155 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 AC093755.1-201ENST00000512950 1023 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 AC026801.2-201ENST00000515352 425 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 RN7SKP82-201ENST00000516786 223 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 RN7SKP116-201ENST00000516902 319 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 AC006518.2-201ENST00000542513 940 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.85□□□□□ -1.79
SNED1Q8TER0 MTND4LP24-201ENST00000572277 291 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 CBX3P2-202ENST00000583365 535 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 NTAN1P1-201ENST00000603150 646 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 AC103881.1-201ENST00000603476 538 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.85□□□□□ -1.79
SNED1Q8TER0 AC005332.10-201ENST00000612725 619 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 AL158196.1-201ENST00000616786 434 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 AL031667.3-201ENST00000620124 655 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 AC139713.2-210ENST00000641741 992 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 SRP72P2-201ENST00000344851 1979 ntBASIC3.85□□□□□ -1.79
SNED1Q8TER0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SNED1Q8TER0 PNPT1P2-201ENST00000456768 2050 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 AL356489.2-201ENST00000566968 3528 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AP000526.1-201ENST00000603308 1388 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SNED1Q8TER0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms