Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 TRBV5-2-201ENST00000489095 273 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 RPS4XP20-201ENST00000505751 772 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 RNY3P15-201ENST00000516297 97 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 SNORA74.1-201ENST00000516320 180 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC012400.1-201ENST00000518452 381 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC005363.1-201ENST00000530779 351 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC126177.3-201ENST00000551839 688 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AL591516.1-201ENST00000611326 274 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 U2.1-201ENST00000618978 145 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 MIR6811-201ENST00000620409 58 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AL031601.2-202ENST00000622650 282 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 AC073136.1-201ENST00000449426 2884 ntBASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.67□□□□□ -1.5
DEPDC4Q8N2C3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 LINC01613-201ENST00000561476 2780 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 SNORD35A-201ENST00000363389 86 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-1303P-201ENST00000364841 107 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 RNU1-84P-201ENST00000365447 164 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-26P-201ENST00000383985 107 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 Y_RNA.577-201ENST00000384794 101 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 MIR1275-201ENST00000408770 80 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 MIR1252-201ENST00000408861 65 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 RN7SKP86-201ENST00000410454 332 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 RN7SKP281-201ENST00000410472 352 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-607P-201ENST00000411283 108 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 AL133396.1-201ENST00000432048 687 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 FTH1P25-201ENST00000447665 469 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 AC097359.1-201ENST00000447946 463 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 AC023194.2-201ENST00000465398 406 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 AF213884.1-201ENST00000488102 463 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 RPL17P19-201ENST00000489069 552 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 SNORA40.14-201ENST00000516543 86 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 AC022882.1-201ENST00000532142 501 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 RPL23AP87-202ENST00000573039 466 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 AC063977.7-201ENST00000594454 337 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-85P-201ENST00000605989 107 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 uc_338.29-201ENST00000615099 168 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 AL122023.1-201ENST00000622847 530 ntBASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
DEPDC4Q8N2C3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 AC068870.1-201ENST00000563737 2455 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 AC125336.1-201ENST00000508893 2827 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-874P-201ENST00000362390 105 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 Y_RNA.151-201ENST00000363566 112 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 RNA5SP232-201ENST00000364144 119 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 Y_RNA.257-201ENST00000364596 102 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 RNU6-174P-201ENST00000410406 106 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 MRPS18CP6-201ENST00000423587 223 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 CKS1BP5-201ENST00000434172 273 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 AL360271.2-201ENST00000447710 161 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 CEACAMP6-201ENST00000452007 574 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 AL353752.1-201ENST00000454946 260 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 AC008571.1-201ENST00000467232 300 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms