Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 DUXAP3-201ENST00000603616 594 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AP001521.1-201ENST00000609150 300 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AC131235.4-201ENST00000609288 620 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AC092106.3-201ENST00000611308 722 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AL592295.2-201ENST00000612578 206 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 SNORD39.4-201ENST00000620099 78 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AC026422.1-201ENST00000623961 452 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 MIR4278-201ENST00000636094 69 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AL157700.1-201ENST00000561973 1432 ntBASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CCDC60Q8IWA6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC60Q8IWA6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
CCDC60Q8IWA6 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC60Q8IWA6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
CCDC60Q8IWA6 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC60Q8IWA6 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.65□□□□□ -1.82
CCDC60Q8IWA6 MTCO1P24-201ENST00000515438 1558 ntBASIC3.65□□□□□ -1.82
CCDC60Q8IWA6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC60Q8IWA6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 RNU2-37P-201ENST00000410695 177 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AL159169.1-201ENST00000421119 127 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AL513174.1-201ENST00000423182 629 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AL035410.1-201ENST00000427409 427 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 ELOCP13-201ENST00000443934 329 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 MTCO2P25-201ENST00000447065 681 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 Z73417.1-201ENST00000447373 778 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC004022.1-201ENST00000447766 1066 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 RPL12P26-201ENST00000452430 487 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 TRBV26-201ENST00000456572 344 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC092757.1-201ENST00000467293 467 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC017015.1-201ENST00000477387 286 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC020893.1-201ENST00000502452 580 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 OR4A45P-201ENST00000529954 901 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 OR5D17P-201ENST00000531492 978 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC008127.2-201ENST00000549925 1075 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC022662.1-201ENST00000580252 331 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC061975.8-201ENST00000587058 721 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC022022.2-201ENST00000602989 360 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC087683.2-201ENST00000611384 326 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC231759.1-201ENST00000616455 597 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC011330.2-201ENST00000621680 635 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AP000770.2-201ENST00000623694 100 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC116618.1-201ENST00000634617 774 ntBASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC60Q8IWA6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 SNRPEP2-201ENST00000397592 279 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AL133384.1-201ENST00000412744 351 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AC009237.5-201ENST00000414271 501 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 COX7BP2-201ENST00000437976 242 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AC006028.1-201ENST00000438379 402 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 RPL21P134-201ENST00000453468 483 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 MTND1P16-201ENST00000465177 898 ntBASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC60Q8IWA6 DSTNP2-201ENST00000504533 515 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms