Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 PABPC1P7-201ENST00000413177 1513 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 AC027287.1-201ENST00000553115 1453 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 RNY3P11-201ENST00000364153 102 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 Y_RNA.297-201ENST00000364950 91 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 Y_RNA.314-201ENST00000365114 102 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 RNU6-441P-201ENST00000384545 106 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 RNU6-1127P-201ENST00000384580 107 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 AL158071.1-201ENST00000430315 461 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 AC007967.1-201ENST00000455422 1159 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 AC116533.1-201ENST00000459748 321 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 RN7SL809P-201ENST00000482040 297 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 RNA5SP362-201ENST00000516048 118 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 IGLV2-28-201ENST00000520681 304 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 HMGB1P42-201ENST00000532126 553 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 AL049839.1-201ENST00000556151 657 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 AC015720.2-201ENST00000567709 334 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 MIR4776-2-201ENST00000580204 80 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 AC119403.2-201ENST00000590960 598 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 AC000123.2-201ENST00000623124 461 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 MIR4272-201ENST00000635924 64 ntBASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
FOXR1Q6PIV2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 Y_RNA.276-201ENST00000364732 109 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 Y_RNA.416-201ENST00000384014 113 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 RNU6-190P-201ENST00000384154 102 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 MIR649-201ENST00000384843 97 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 AL583834.1-201ENST00000406943 343 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 MYL6P5-201ENST00000412707 459 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 RPL37P1-201ENST00000432310 284 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 MRPS18BP2-201ENST00000434310 759 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 NDUFB4P8-201ENST00000435351 367 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 AC099799.1-201ENST00000439809 192 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 AC098831.1-201ENST00000440661 216 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 RPL9P32-201ENST00000464118 620 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 AC092865.4-201ENST00000477936 615 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 AP002812.1-201ENST00000495378 474 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 RNU6-397P-201ENST00000516226 104 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 AC022404.1-201ENST00000555320 273 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 SDR42E1P1-201ENST00000611327 477 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 AC009902.3-201ENST00000606235 2172 ntBASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
FOXR1Q6PIV2 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
FOXR1Q6PIV2 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
FOXR1Q6PIV2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXR1Q6PIV2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXR1Q6PIV2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.83□□□□□ -1.48
FOXR1Q6PIV2 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
FOXR1Q6PIV2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.83□□□□□ -1.48
FOXR1Q6PIV2 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
FOXR1Q6PIV2 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.83□□□□□ -1.48
FOXR1Q6PIV2 RNU6-545P-201ENST00000362681 104 ntBASIC5.83□□□□□ -1.48
FOXR1Q6PIV2 RNU6-97P-201ENST00000363387 104 ntBASIC5.83□□□□□ -1.48
FOXR1Q6PIV2 RNU1-136P-201ENST00000384181 164 ntBASIC5.83□□□□□ -1.48
FOXR1Q6PIV2 RNU6-842P-201ENST00000384269 107 ntBASIC5.83□□□□□ -1.48
FOXR1Q6PIV2 Y_RNA.464-201ENST00000384282 110 ntBASIC5.83□□□□□ -1.48
FOXR1Q6PIV2 RNU6-550P-201ENST00000391057 101 ntBASIC5.83□□□□□ -1.48
FOXR1Q6PIV2 RPL11P3-201ENST00000395256 523 ntBASIC5.83□□□□□ -1.48
FOXR1Q6PIV2 AL096829.1-201ENST00000413677 457 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms