Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 MIR492-201ENST00000638676 116 ntBASIC3.14□□□□□ -1.91
ANKRD55Q3KP44 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.14□□□□□ -1.91
ANKRD55Q3KP44 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
ANKRD55Q3KP44 AC097714.1-201ENST00000511272 1647 ntBASIC3.14□□□□□ -1.91
ANKRD55Q3KP44 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ANKRD55Q3KP44 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.14□□□□□ -1.91
ANKRD55Q3KP44 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
ANKRD55Q3KP44 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ANKRD55Q3KP44 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
ANKRD55Q3KP44 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 MIR199A2-201ENST00000385289 110 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 RSL24D1P4-201ENST00000400938 484 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 MTND4P13-201ENST00000402078 1023 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AL136372.1-201ENST00000403060 228 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 RNU6-1077P-201ENST00000410506 102 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 RNU6-628P-201ENST00000410675 107 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 UBE2D3P2-201ENST00000424409 445 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AC091390.1-201ENST00000433904 331 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 NDUFB1P1-201ENST00000435191 180 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 RNA5SP310-201ENST00000459084 116 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 RN7SL132P-201ENST00000478131 296 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 MTND2P14-201ENST00000482139 351 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 VN1R104P-201ENST00000505115 1009 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AC093281.2-201ENST00000510153 597 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AC093853.1-201ENST00000515689 483 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 SNORD59.2-201ENST00000516873 68 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 RNA5SP179-201ENST00000517284 121 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AC105185.1-201ENST00000518705 535 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 NDUFB9P3-201ENST00000521269 501 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 CYCSP2-201ENST00000558168 301 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 TUG1_1.1-201ENST00000610654 145 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AC092628.2-201ENST00000622492 339 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AP002791.1-201ENST00000623291 381 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 OR52H1-202ENST00000641796 1061 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 ZNF542P-204ENST00000482727 1305 ntBASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.13□□□□□ -1.91
ANKRD55Q3KP44 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 AL356473.1-201ENST00000406203 1408 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 HMGB1P17-201ENST00000403495 628 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 AL136116.1-201ENST00000403591 381 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 AL354719.1-201ENST00000406535 843 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 RNU2-47P-201ENST00000410649 186 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 MTCYBP38-201ENST00000417160 1123 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 BEND7P1-201ENST00000422058 457 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 RPL27AP8-201ENST00000424277 446 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 RSL24D1P6-201ENST00000426934 401 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 AL590233.1-201ENST00000430017 456 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 TBCAP1-201ENST00000436520 327 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 HSPE1P28-201ENST00000443139 211 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 HSFY6P-201ENST00000445573 403 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 OR6K5P-201ENST00000447050 945 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 RPL36AP33-201ENST00000450395 310 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 AC021146.5-201ENST00000503544 545 ntBASIC3.12□□□□□ -1.91
ANKRD55Q3KP44 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms