Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 HIGD1AP5-201ENST00000529959 259 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.17□□□□□ -1.58
SSRP1Q08945 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSRP1Q08945 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSRP1Q08945 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.17□□□□□ -1.58
SSRP1Q08945 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.17□□□□□ -1.58
SSRP1Q08945 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.17□□□□□ -1.58
SSRP1Q08945 MIR4458-201ENST00000578872 75 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.17□□□□□ -1.58
SSRP1Q08945 RPL12P25-202ENST00000598100 674 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 uc_338.12-201ENST00000616344 181 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 AC002553.4-201ENST00000616896 331 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SSRP1Q08945 AC009704.2-201ENST00000618739 483 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 MIR1321-201ENST00000637766 79 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SSRP1Q08945 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSRP1Q08945 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.17□□□□□ -1.58
SSRP1Q08945 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSRP1Q08945 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SSRP1Q08945 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSRP1Q08945 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
SSRP1Q08945 OR56B2P-202ENST00000641377 2453 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SSRP1Q08945 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SSRP1Q08945 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.17□□□□□ -1.58
SSRP1Q08945 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
SSRP1Q08945 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSRP1Q08945 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
SSRP1Q08945 BTBD10P1-201ENST00000549824 1352 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 AC138915.3-201ENST00000562908 1389 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.16□□□□□ -1.58
SSRP1Q08945 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.16□□□□□ -1.58
SSRP1Q08945 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.16□□□□□ -1.58
SSRP1Q08945 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.16□□□□□ -1.58
SSRP1Q08945 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SSRP1Q08945 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SSRP1Q08945 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSRP1Q08945 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.16□□□□□ -1.58
SSRP1Q08945 RNA5SP307-201ENST00000362863 116 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 Y_RNA.159-201ENST00000363674 87 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 RNU5E-4P-201ENST00000364931 120 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 MIR19A-201ENST00000384878 82 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 MIR153-1-201ENST00000384914 90 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 CYB5AP4-201ENST00000396692 399 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 RN7SKP167-201ENST00000411047 285 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 RPS20P14-201ENST00000412545 360 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 AC009237.10-201ENST00000414112 510 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.16□□□□□ -1.58
SSRP1Q08945 AC119751.6-201ENST00000416712 186 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 CHIAP3-201ENST00000423668 1133 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 RPEP3-201ENST00000425462 676 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.16□□□□□ -1.58
SSRP1Q08945 RPL23AP33-201ENST00000442301 452 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.16□□□□□ -1.58
SSRP1Q08945 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SSRP1Q08945 HMGB1P25-201ENST00000468402 607 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.16□□□□□ -1.58
SSRP1Q08945 TMEM248P1-201ENST00000510579 951 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.16□□□□□ -1.58
SSRP1Q08945 RNA5SP464-201ENST00000516251 108 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 Y_RNA.704-201ENST00000516851 102 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 RN7SKP92-201ENST00000517266 244 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.16□□□□□ -1.58
SSRP1Q08945 AP003072.2-201ENST00000527756 676 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 COX6CP3-201ENST00000580869 223 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.16□□□□□ -1.58
SSRP1Q08945 AC115621.1-201ENST00000604653 858 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 AL160290.3-201ENST00000604869 165 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.16□□□□□ -1.58
SSRP1Q08945 MIR6820-201ENST00000611508 62 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SSRP1Q08945 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSRP1Q08945 MIR6891-201ENST00000618788 93 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC5.16□□□□□ -1.58
SSRP1Q08945 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SSRP1Q08945 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.16□□□□□ -1.58
SSRP1Q08945 MFSD8-216ENST00000641147 4009 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 RAD17P1-201ENST00000418130 2042 ntBASIC5.16□□□□□ -1.58
SSRP1Q08945 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.16□□□□□ -1.58
SSRP1Q08945 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSRP1Q08945 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SSRP1Q08945 AL138713.1-201ENST00000624026 2130 ntBASIC5.15□□□□□ -1.58
SSRP1Q08945 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SSRP1Q08945 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.15□□□□□ -1.58
SSRP1Q08945 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SSRP1Q08945 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SSRP1Q08945 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.15□□□□□ -1.58
SSRP1Q08945 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.15□□□□□ -1.58
SSRP1Q08945 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SSRP1Q08945 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SSRP1Q08945 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SSRP1Q08945 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SSRP1Q08945 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSRP1Q08945 RNU6-398P-201ENST00000384143 109 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 RNU6-456P-201ENST00000384493 107 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 RNA5SP372-201ENST00000390836 115 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 AL603766.1-201ENST00000407763 664 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 HMGN1P24-201ENST00000412282 298 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms