Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC133104.1-201ENST00000429100 218 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 MTCO2P11-201ENST00000431069 680 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.03□□□□□ -1.6
HERVK_113P62684 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.03□□□□□ -1.6
HERVK_113P62684 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.03□□□□□ -1.6
HERVK_113P62684 AL591623.2-201ENST00000449978 222 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.03□□□□□ -1.6
HERVK_113P62684 MTND1P12-201ENST00000455231 147 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.03□□□□□ -1.6
HERVK_113P62684 RPL7P15-201ENST00000461190 712 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 AC023598.1-201ENST00000472521 361 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 RN7SL812P-201ENST00000493791 279 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.03□□□□□ -1.6
HERVK_113P62684 AC022616.6-201ENST00000520479 119 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 OR5BC1P-201ENST00000529327 739 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HERVK_113P62684 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.03□□□□□ -1.6
HERVK_113P62684 FGF7P1-201ENST00000582820 288 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 NF1P5-201ENST00000588287 448 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.03□□□□□ -1.6
HERVK_113P62684 AL356055.1-201ENST00000602528 446 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 BNIP3P9-201ENST00000603714 553 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 AL354984.3-201ENST00000604803 325 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 AL365503.1-201ENST00000605247 905 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 AC008945.2-201ENST00000606056 604 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HERVK_113P62684 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.03□□□□□ -1.6
HERVK_113P62684 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HERVK_113P62684 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HERVK_113P62684 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HERVK_113P62684 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HERVK_113P62684 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERVK_113P62684 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERVK_113P62684 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERVK_113P62684 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERVK_113P62684 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERVK_113P62684 NXPH1-205ENST00000602349 1953 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERVK_113P62684 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.02□□□□□ -1.61
HERVK_113P62684 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.02□□□□□ -1.61
HERVK_113P62684 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HERVK_113P62684 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERVK_113P62684 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.02□□□□□ -1.61
HERVK_113P62684 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.02□□□□□ -1.61
HERVK_113P62684 RNU6-761P-201ENST00000384148 107 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 RNU6-1103P-201ENST00000384150 107 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 RNU2-8P-201ENST00000410727 190 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 AC069218.2-201ENST00000411665 344 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 RPS20P14-201ENST00000412545 360 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.02□□□□□ -1.61
HERVK_113P62684 AL157831.1-201ENST00000426134 473 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 AC104850.1-201ENST00000435940 476 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.02□□□□□ -1.61
HERVK_113P62684 RPL21P89-201ENST00000444021 467 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 TPT1P14-201ENST00000448018 505 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 AC034222.1-201ENST00000494052 532 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.02□□□□□ -1.61
HERVK_113P62684 RNA5SP519-201ENST00000516480 119 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.02□□□□□ -1.61
HERVK_113P62684 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
HERVK_113P62684 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.02□□□□□ -1.61
HERVK_113P62684 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HERVK_113P62684 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.02□□□□□ -1.61
HERVK_113P62684 AC107954.1-201ENST00000565906 727 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 AC018552.3-201ENST00000567416 561 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.02□□□□□ -1.61
HERVK_113P62684 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.02□□□□□ -1.61
HERVK_113P62684 AC011468.4-201ENST00000603942 409 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.02□□□□□ -1.61
HERVK_113P62684 OR10AB1P-201ENST00000609613 938 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.02□□□□□ -1.61
HERVK_113P62684 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.02□□□□□ -1.61
HERVK_113P62684 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.02□□□□□ -1.61
HERVK_113P62684 MIR1321-201ENST00000637766 79 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 AL596275.2-204ENST00000641628 552 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 AL596275.2-206ENST00000641957 626 ntBASIC5.02□□□□□ -1.61
HERVK_113P62684 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.02□□□□□ -1.61
HERVK_113P62684 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
HERVK_113P62684 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERVK_113P62684 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
HERVK_113P62684 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HERVK_113P62684 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HERVK_113P62684 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.01□□□□□ -1.61
HERVK_113P62684 AC009229.4-201ENST00000623854 1947 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
HERVK_113P62684 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HERVK_113P62684 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.01□□□□□ -1.61
HERVK_113P62684 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
HERVK_113P62684 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HERVK_113P62684 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.01□□□□□ -1.61
HERVK_113P62684 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.01□□□□□ -1.61
HERVK_113P62684 RNU1-14P-201ENST00000362759 152 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 RNU6-181P-201ENST00000363225 107 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 Y_RNA.160-201ENST00000363677 92 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 RNU6-282P-201ENST00000365357 103 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 AL024474.1-201ENST00000404655 591 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 RNA5SP36-201ENST00000410197 133 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 RN7SKP235-201ENST00000410662 305 ntBASIC5.01□□□□□ -1.61
HERVK_113P62684 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.01□□□□□ -1.61
HERVK_113P62684 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms