Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.87□□□□□ -1.95
VSX2P58304 AC011825.1-201ENST00000484967 388 ntBASIC2.87□□□□□ -1.95
VSX2P58304 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.87□□□□□ -1.95
VSX2P58304 MTCO2P9-201ENST00000503214 694 ntBASIC2.87□□□□□ -1.95
VSX2P58304 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.87□□□□□ -1.95
VSX2P58304 PRELID3BP6-201ENST00000503839 571 ntBASIC2.87□□□□□ -1.95
VSX2P58304 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.87□□□□□ -1.95
VSX2P58304 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.87□□□□□ -1.95
VSX2P58304 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.87□□□□□ -1.95
VSX2P58304 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.87□□□□□ -1.95
VSX2P58304 AC113192.3-201ENST00000529152 742 ntBASIC2.87□□□□□ -1.95
VSX2P58304 OR4A45P-201ENST00000529954 901 ntBASIC2.87□□□□□ -1.95
VSX2P58304 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.87□□□□□ -1.95
VSX2P58304 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VSX2P58304 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.87□□□□□ -1.95
VSX2P58304 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.87□□□□□ -1.95
VSX2P58304 ZNF971P-201ENST00000562068 1249 ntBASIC2.87□□□□□ -1.95
VSX2P58304 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.87□□□□□ -1.95
VSX2P58304 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.87□□□□□ -1.95
VSX2P58304 AC034268.2-201ENST00000571784 482 ntBASIC2.87□□□□□ -1.95
VSX2P58304 AC124283.4-201ENST00000581815 456 ntBASIC2.87□□□□□ -1.95
VSX2P58304 AC022069.1-201ENST00000582910 658 ntBASIC2.87□□□□□ -1.95
VSX2P58304 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.87□□□□□ -1.95
VSX2P58304 XIAPP1-201ENST00000603162 600 ntBASIC2.87□□□□□ -1.95
VSX2P58304 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.87□□□□□ -1.95
VSX2P58304 AC090116.1-201ENST00000615679 446 ntBASIC2.87□□□□□ -1.95
VSX2P58304 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
VSX2P58304 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
VSX2P58304 SCARNA15.3-201ENST00000626315 122 ntBASIC2.87□□□□□ -1.95
VSX2P58304 SCARNA4.1-201ENST00000628597 123 ntBASIC2.87□□□□□ -1.95
VSX2P58304 ZNF807-201ENST00000328088 1707 ntBASIC2.87□□□□□ -1.95
VSX2P58304 AC103988.1-201ENST00000566382 2177 ntBASIC2.87□□□□□ -1.95
VSX2P58304 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.87□□□□□ -1.95
VSX2P58304 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VSX2P58304 AC073325.2-201ENST00000339545 159 ntBASIC2.86□□□□□ -1.95
VSX2P58304 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
VSX2P58304 AL354719.1-201ENST00000406535 843 ntBASIC2.86□□□□□ -1.95
VSX2P58304 RNA5SP274-201ENST00000410484 108 ntBASIC2.86□□□□□ -1.95
VSX2P58304 RN7SKP123-201ENST00000410732 291 ntBASIC2.86□□□□□ -1.95
VSX2P58304 AC233981.1-201ENST00000423224 461 ntBASIC2.86□□□□□ -1.95
VSX2P58304 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.86□□□□□ -1.95
VSX2P58304 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.86□□□□□ -1.95
VSX2P58304 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.86□□□□□ -1.95
VSX2P58304 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.86□□□□□ -1.95
VSX2P58304 RPS3AP14-201ENST00000483907 780 ntBASIC2.86□□□□□ -1.95
VSX2P58304 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.86□□□□□ -1.95
VSX2P58304 AC098799.1-201ENST00000504752 800 ntBASIC2.86□□□□□ -1.95
VSX2P58304 RNU6-1073P-201ENST00000517182 106 ntBASIC2.86□□□□□ -1.95
VSX2P58304 OR8K4P-201ENST00000534608 872 ntBASIC2.86□□□□□ -1.95
VSX2P58304 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.86□□□□□ -1.95
VSX2P58304 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.86□□□□□ -1.95
VSX2P58304 MTCO3P24-201ENST00000572729 782 ntBASIC2.86□□□□□ -1.95
VSX2P58304 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.86□□□□□ -1.95
VSX2P58304 U73479.1-201ENST00000618062 168 ntBASIC2.86□□□□□ -1.95
VSX2P58304 AC007318.2-201ENST00000620999 243 ntBASIC2.86□□□□□ -1.95
VSX2P58304 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.86□□□□□ -1.95
VSX2P58304 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.86□□□□□ -1.95
VSX2P58304 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.86□□□□□ -1.95
VSX2P58304 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.86□□□□□ -1.95
VSX2P58304 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VSX2P58304 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VSX2P58304 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
VSX2P58304 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VSX2P58304 ZNF734P-201ENST00000419494 1534 ntBASIC2.85□□□□□ -1.95
VSX2P58304 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.85□□□□□ -1.95
VSX2P58304 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.85□□□□□ -1.95
VSX2P58304 SNORA51.4-201ENST00000364993 124 ntBASIC2.85□□□□□ -1.95
VSX2P58304 RNU6-207P-201ENST00000384137 107 ntBASIC2.85□□□□□ -1.95
VSX2P58304 RNU6-339P-201ENST00000384310 107 ntBASIC2.85□□□□□ -1.95
VSX2P58304 SNORD116-23-201ENST00000384645 92 ntBASIC2.85□□□□□ -1.95
VSX2P58304 MTND4LP20-201ENST00000402379 270 ntBASIC2.85□□□□□ -1.95
VSX2P58304 RPL5P18-201ENST00000406671 891 ntBASIC2.85□□□□□ -1.95
VSX2P58304 AC245054.2-201ENST00000415639 319 ntBASIC2.85□□□□□ -1.95
VSX2P58304 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.85□□□□□ -1.95
VSX2P58304 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.85□□□□□ -1.95
VSX2P58304 AC096632.1-201ENST00000427395 310 ntBASIC2.85□□□□□ -1.95
VSX2P58304 AL035410.1-201ENST00000427409 427 ntBASIC2.85□□□□□ -1.95
VSX2P58304 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.85□□□□□ -1.95
VSX2P58304 AP001486.1-201ENST00000463339 476 ntBASIC2.85□□□□□ -1.95
VSX2P58304 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.85□□□□□ -1.95
VSX2P58304 AL049873.1-201ENST00000480540 376 ntBASIC2.85□□□□□ -1.95
VSX2P58304 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.85□□□□□ -1.95
VSX2P58304 AC010374.2-201ENST00000512933 535 ntBASIC2.85□□□□□ -1.95
VSX2P58304 RNU1-103P-201ENST00000516502 125 ntBASIC2.85□□□□□ -1.95
VSX2P58304 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VSX2P58304 AP004371.1-201ENST00000525240 214 ntBASIC2.85□□□□□ -1.95
VSX2P58304 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.85□□□□□ -1.95
VSX2P58304 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.85□□□□□ -1.95
VSX2P58304 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.85□□□□□ -1.95
VSX2P58304 AC087481.2-201ENST00000565492 330 ntBASIC2.85□□□□□ -1.95
VSX2P58304 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.85□□□□□ -1.95
VSX2P58304 AC074051.3-201ENST00000570238 358 ntBASIC2.85□□□□□ -1.95
VSX2P58304 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.85□□□□□ -1.95
VSX2P58304 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.85□□□□□ -1.95
VSX2P58304 AL669831.4-202ENST00000590817 238 ntBASIC2.85□□□□□ -1.95
VSX2P58304 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.85□□□□□ -1.95
VSX2P58304 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.85□□□□□ -1.95
VSX2P58304 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.85□□□□□ -1.95
VSX2P58304 AC084035.1-201ENST00000634543 607 ntBASIC2.85□□□□□ -1.95
VSX2P58304 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms