Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RIPK4P57078 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RIPK4P57078 SNORA51.12-201ENST00000384448 134 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.55□□□□□ -1.84
RIPK4P57078 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.55□□□□□ -1.84
RIPK4P57078 AC008173.1-201ENST00000418901 264 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.55□□□□□ -1.84
RIPK4P57078 RNF2P1-201ENST00000442955 1010 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 RPL7P55-201ENST00000450522 746 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RIPK4P57078 RPL31P13-201ENST00000484151 370 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 DYNLL1P6-201ENST00000503440 264 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.55□□□□□ -1.84
RIPK4P57078 AC008885.2-201ENST00000509506 930 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.55□□□□□ -1.84
RIPK4P57078 AC119751.5-201ENST00000514077 770 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 SNORA31.26-201ENST00000517250 137 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 AP001207.1-201ENST00000524051 481 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.55□□□□□ -1.84
RIPK4P57078 AC095057.3-201ENST00000567102 1157 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.55□□□□□ -1.84
RIPK4P57078 AC006270.2-201ENST00000578523 652 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 AC007998.5-201ENST00000622938 237 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.55□□□□□ -1.84
RIPK4P57078 AC010872.1-201ENST00000624225 675 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 AC017104.5-201ENST00000637647 639 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 AL353746.1-201ENST00000566293 6881 ntBASIC3.55□□□□□ -1.84
RIPK4P57078 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.55□□□□□ -1.84
RIPK4P57078 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RIPK4P57078 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RIPK4P57078 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RIPK4P57078 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RIPK4P57078 MIR16-2-201ENST00000362117 81 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 RNA5SP295-201ENST00000362655 121 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 AL355379.1-201ENST00000405542 640 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.54□□□□□ -1.84
RIPK4P57078 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.54□□□□□ -1.84
RIPK4P57078 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.54□□□□□ -1.84
RIPK4P57078 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.54□□□□□ -1.84
RIPK4P57078 AC008280.2-201ENST00000455473 307 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 FCF1P6-201ENST00000456841 595 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 RPL21P8-201ENST00000465083 535 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.54□□□□□ -1.84
RIPK4P57078 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.54□□□□□ -1.84
RIPK4P57078 AC016550.1-201ENST00000505348 785 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 AC119751.4-201ENST00000507498 357 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 MTND4LP22-201ENST00000508209 276 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 SNORA9.3-201ENST00000516383 129 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.54□□□□□ -1.84
RIPK4P57078 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
RIPK4P57078 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.54□□□□□ -1.84
RIPK4P57078 AP000857.1-201ENST00000532151 543 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 AP004242.1-201ENST00000533701 349 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 AL133271.1-201ENST00000538229 291 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.54□□□□□ -1.84
RIPK4P57078 AC005951.1-201ENST00000576706 485 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 AC133794.1-201ENST00000602731 914 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 AC008277.2-201ENST00000605196 797 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 AP003117.2-201ENST00000606010 545 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 OR2AS2P-201ENST00000606902 342 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 AC107871.2-201ENST00000612894 502 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 MIR4278-201ENST00000636094 69 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 AC132825.7-201ENST00000638744 335 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 AC006378.2-201ENST00000623178 2476 ntBASIC3.54□□□□□ -1.84
RIPK4P57078 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RIPK4P57078 AC093010.3-201ENST00000570269 15214 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 AC011978.2-201ENST00000569835 2054 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 ZNF33CP-201ENST00000432492 2030 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RIPK4P57078 AC109315.1-201ENST00000584143 1347 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RIPK4P57078 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.53□□□□□ -1.84
RIPK4P57078 MIR620-201ENST00000385232 95 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 PRRC2CP1-201ENST00000404428 159 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 RNA5SP184-201ENST00000411071 108 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.53□□□□□ -1.84
RIPK4P57078 AL445183.3-201ENST00000414168 502 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 NUP35P1-201ENST00000422734 947 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.53□□□□□ -1.84
RIPK4P57078 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.53□□□□□ -1.84
RIPK4P57078 AP000936.2-201ENST00000447151 681 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 AL109933.2-201ENST00000452651 260 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.53□□□□□ -1.84
RIPK4P57078 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.53□□□□□ -1.84
RIPK4P57078 NAMPTP2-201ENST00000505629 1115 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 SNORA31.21-201ENST00000517180 77 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 AC090136.1-201ENST00000520009 240 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.53□□□□□ -1.84
RIPK4P57078 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.53□□□□□ -1.84
RIPK4P57078 AP003717.3-201ENST00000544832 1180 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.53□□□□□ -1.84
RIPK4P57078 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.53□□□□□ -1.84
RIPK4P57078 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.53□□□□□ -1.84
RIPK4P57078 AC010653.1-201ENST00000571108 881 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.53□□□□□ -1.84
RIPK4P57078 MIR4760-201ENST00000585040 80 ntBASIC3.53□□□□□ -1.84
RIPK4P57078 BNIP3P40-201ENST00000596017 556 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms