Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RN7SKP57-201ENST00000517248 293 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AC027309.2-201ENST00000520566 192 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AC093331.1-201ENST00000521474 169 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AC004024.1-201ENST00000549244 247 ntBASIC3.49□□□□□ -1.85
PEX3P56589 SULT1C2P1-202ENST00000562418 459 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.49□□□□□ -1.85
PEX3P56589 UBL5P2-201ENST00000583788 219 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.49□□□□□ -1.85
PEX3P56589 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.49□□□□□ -1.85
PEX3P56589 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.49□□□□□ -1.85
PEX3P56589 PRELID3BP8-201ENST00000604148 295 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AL161756.2-201ENST00000604597 246 ntBASIC3.49□□□□□ -1.85
PEX3P56589 HSPE1P14-201ENST00000605812 302 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AC105429.2-201ENST00000610567 517 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AF117829.1-206ENST00000621883 3802 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AC073476.4-201ENST00000628409 72 ntBASIC3.49□□□□□ -1.85
PEX3P56589 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.49□□□□□ -1.85
PEX3P56589 AC090897.3-201ENST00000636973 1157 ntBASIC3.49□□□□□ -1.85
PEX3P56589 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PEX3P56589 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PEX3P56589 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PEX3P56589 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.49□□□□□ -1.85
PEX3P56589 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
PEX3P56589 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PEX3P56589 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PEX3P56589 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PEX3P56589 ZNF33CP-201ENST00000432492 2030 ntBASIC3.48□□□□□ -1.85
PEX3P56589 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.48□□□□□ -1.85
PEX3P56589 RPL7P26-201ENST00000333817 754 ntBASIC3.48□□□□□ -1.85
PEX3P56589 RNA5SP374-201ENST00000362939 125 ntBASIC3.48□□□□□ -1.85
PEX3P56589 RNU6-1066P-201ENST00000363573 105 ntBASIC3.48□□□□□ -1.85
PEX3P56589 RNU6-560P-201ENST00000364007 108 ntBASIC3.48□□□□□ -1.85
PEX3P56589 RNU6-1226P-201ENST00000384317 107 ntBASIC3.48□□□□□ -1.85
PEX3P56589 MIR649-201ENST00000384843 97 ntBASIC3.48□□□□□ -1.85
PEX3P56589 RNA5SP80-201ENST00000410475 111 ntBASIC3.48□□□□□ -1.85
PEX3P56589 RNA5SP107-201ENST00000411358 122 ntBASIC3.48□□□□□ -1.85
PEX3P56589 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.48□□□□□ -1.85
PEX3P56589 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.48□□□□□ -1.85
PEX3P56589 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.48□□□□□ -1.85
PEX3P56589 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
PEX3P56589 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.48□□□□□ -1.85
PEX3P56589 BX276092.4-201ENST00000452056 248 ntBASIC3.48□□□□□ -1.85
PEX3P56589 NDUFA5P7-201ENST00000452914 242 ntBASIC3.48□□□□□ -1.85
PEX3P56589 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PEX3P56589 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
PEX3P56589 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.48□□□□□ -1.85
PEX3P56589 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PEX3P56589 AC012170.1-201ENST00000495139 359 ntBASIC3.48□□□□□ -1.85
PEX3P56589 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.48□□□□□ -1.85
PEX3P56589 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.48□□□□□ -1.85
PEX3P56589 AC023141.12-201ENST00000512399 199 ntBASIC3.48□□□□□ -1.85
PEX3P56589 AC093755.1-201ENST00000512950 1023 ntBASIC3.48□□□□□ -1.85
PEX3P56589 AC104057.1-201ENST00000515547 497 ntBASIC3.48□□□□□ -1.85
PEX3P56589 RNU6-1225P-201ENST00000516336 65 ntBASIC3.48□□□□□ -1.85
PEX3P56589 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.48□□□□□ -1.85
PEX3P56589 SNORA70.24-201ENST00000517233 118 ntBASIC3.48□□□□□ -1.85
PEX3P56589 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.48□□□□□ -1.85
PEX3P56589 AC104027.1-201ENST00000521887 300 ntBASIC3.48□□□□□ -1.85
PEX3P56589 PTP4A1P6-201ENST00000531034 478 ntBASIC3.48□□□□□ -1.85
PEX3P56589 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.48□□□□□ -1.85
PEX3P56589 MTCYBP27-201ENST00000555160 670 ntBASIC3.48□□□□□ -1.85
PEX3P56589 MIR4504-201ENST00000577413 92 ntBASIC3.48□□□□□ -1.85
PEX3P56589 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.48□□□□□ -1.85
PEX3P56589 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.48□□□□□ -1.85
PEX3P56589 AC012493.2-201ENST00000595083 291 ntBASIC3.48□□□□□ -1.85
PEX3P56589 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.48□□□□□ -1.85
PEX3P56589 AC013244.3-201ENST00000605614 388 ntBASIC3.48□□□□□ -1.85
PEX3P56589 AC107952.2-201ENST00000606048 486 ntBASIC3.48□□□□□ -1.85
PEX3P56589 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.48□□□□□ -1.85
PEX3P56589 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.48□□□□□ -1.85
PEX3P56589 AC068620.4-201ENST00000636730 1182 ntBASIC3.48□□□□□ -1.85
PEX3P56589 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PEX3P56589 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.48□□□□□ -1.85
PEX3P56589 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.48□□□□□ -1.85
PEX3P56589 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PEX3P56589 Z99496.1-201ENST00000469424 1477 ntBASIC3.47□□□□□ -1.85
PEX3P56589 SEPT7P7-201ENST00000420492 1301 ntBASIC3.47□□□□□ -1.85
PEX3P56589 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PEX3P56589 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PEX3P56589 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PEX3P56589 RNU5D-1-201ENST00000363299 116 ntBASIC3.47□□□□□ -1.85
PEX3P56589 RNA5SP167-201ENST00000365461 116 ntBASIC3.47□□□□□ -1.85
PEX3P56589 RNU6-761P-201ENST00000384148 107 ntBASIC3.47□□□□□ -1.85
PEX3P56589 SNORA7.4-201ENST00000384249 137 ntBASIC3.47□□□□□ -1.85
PEX3P56589 BTBD10P2-201ENST00000404779 676 ntBASIC3.47□□□□□ -1.85
PEX3P56589 SNORA11.1-201ENST00000408133 129 ntBASIC3.47□□□□□ -1.85
PEX3P56589 AC007899.1-201ENST00000412776 775 ntBASIC3.47□□□□□ -1.85
PEX3P56589 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.47□□□□□ -1.85
PEX3P56589 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.47□□□□□ -1.85
PEX3P56589 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.47□□□□□ -1.85
PEX3P56589 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.47□□□□□ -1.85
PEX3P56589 USP9YP11-201ENST00000427537 717 ntBASIC3.47□□□□□ -1.85
PEX3P56589 AL512649.1-201ENST00000428997 581 ntBASIC3.47□□□□□ -1.85
PEX3P56589 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.47□□□□□ -1.85
PEX3P56589 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.47□□□□□ -1.85
PEX3P56589 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.47□□□□□ -1.85
PEX3P56589 RPS3AP12-201ENST00000443616 753 ntBASIC3.47□□□□□ -1.85
PEX3P56589 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.47□□□□□ -1.85
PEX3P56589 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.47□□□□□ -1.85
PEX3P56589 Z73417.1-201ENST00000447373 778 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms