Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RNU6-50P-201ENST00000362356 103 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 RNU6-1066P-201ENST00000363573 105 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PKNOX1P55347 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.03□□□□□ -1.92
PKNOX1P55347 DEFB109C-201ENST00000382575 264 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 DEFB109B-201ENST00000382656 264 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PKNOX1P55347 SNORD65.1-201ENST00000390889 71 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 ARF4P3-201ENST00000397387 509 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 PTMAP2-201ENST00000397627 327 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 AC025750.1-201ENST00000399891 379 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 MTCO1P56-201ENST00000401674 224 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 RNA5SP129-201ENST00000410276 118 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 RNA5SP274-201ENST00000410484 108 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 RN7SKP58-201ENST00000411010 305 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 AC063979.1-201ENST00000415539 377 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 RPF2P1-201ENST00000424137 906 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 AC092393.1-201ENST00000439625 742 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 AC093155.1-201ENST00000440164 826 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PKNOX1P55347 AC112492.1-201ENST00000449607 712 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 AC079776.3-201ENST00000450665 370 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.03□□□□□ -1.92
PKNOX1P55347 HMGB1P25-201ENST00000468402 607 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 RPS26P21-201ENST00000475397 348 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 AC108860.1-201ENST00000484521 383 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.03□□□□□ -1.92
PKNOX1P55347 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
PKNOX1P55347 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.03□□□□□ -1.92
PKNOX1P55347 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
PKNOX1P55347 AC112206.4-201ENST00000515142 405 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 RNU1-61P-201ENST00000516107 151 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 RN7SKP43-201ENST00000516173 320 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.03□□□□□ -1.92
PKNOX1P55347 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.03□□□□□ -1.92
PKNOX1P55347 DEFB130C-202ENST00000530001 230 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.03□□□□□ -1.92
PKNOX1P55347 MTCYBP27-201ENST00000555160 670 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 NCAPGP2-201ENST00000557911 754 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.03□□□□□ -1.92
PKNOX1P55347 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.03□□□□□ -1.92
PKNOX1P55347 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.03□□□□□ -1.92
PKNOX1P55347 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.03□□□□□ -1.92
PKNOX1P55347 AL390240.1-201ENST00000612950 384 ntBASIC3.03□□□□□ -1.92
PKNOX1P55347 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PKNOX1P55347 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PKNOX1P55347 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PKNOX1P55347 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PKNOX1P55347 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PKNOX1P55347 SNORA51.4-201ENST00000364993 124 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PKNOX1P55347 MIR200C-201ENST00000384980 68 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 RNU6-298P-201ENST00000390888 96 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 RNU6-1300P-201ENST00000391046 108 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AC110754.1-201ENST00000399740 601 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AL354719.1-201ENST00000406535 843 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 RNU4-65P-201ENST00000410473 140 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.02□□□□□ -1.93
PKNOX1P55347 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.02□□□□□ -1.93
PKNOX1P55347 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.02□□□□□ -1.93
PKNOX1P55347 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.02□□□□□ -1.93
PKNOX1P55347 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.02□□□□□ -1.93
PKNOX1P55347 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.02□□□□□ -1.93
PKNOX1P55347 AL445669.2-201ENST00000454425 421 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 BTF3P5-201ENST00000457252 467 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AC008155.2-201ENST00000464337 397 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 RN7SL293P-201ENST00000481765 281 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AC013828.1-201ENST00000481845 158 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AC093752.1-206ENST00000511823 336 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AC027309.2-201ENST00000520566 192 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.02□□□□□ -1.93
PKNOX1P55347 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.02□□□□□ -1.93
PKNOX1P55347 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.02□□□□□ -1.93
PKNOX1P55347 AL121603.1-201ENST00000553815 142 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.02□□□□□ -1.93
PKNOX1P55347 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.02□□□□□ -1.93
PKNOX1P55347 AC055876.1-202ENST00000567053 138 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AC034268.2-201ENST00000571784 482 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 MIR5708-201ENST00000579723 85 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 ZNF415P1-201ENST00000582279 1166 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.02□□□□□ -1.93
PKNOX1P55347 CCDC58P3-201ENST00000590792 430 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 DNAJC19P3-201ENST00000594491 331 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AC128687.1-201ENST00000605304 619 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AC138932.5-201ENST00000617759 563 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AC018755.4-201ENST00000619715 454 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AC092650.2-201ENST00000619984 902 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AC109454.4-201ENST00000623411 649 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.02□□□□□ -1.93
PKNOX1P55347 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.02□□□□□ -1.93
PKNOX1P55347 MTND5P7-201ENST00000413558 1798 ntBASIC3.02□□□□□ -1.93
PKNOX1P55347 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PKNOX1P55347 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PKNOX1P55347 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PKNOX1P55347 AC244517.1-201ENST00000606030 2086 ntBASIC3.01□□□□□ -1.93
PKNOX1P55347 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PKNOX1P55347 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PKNOX1P55347 RNU2-28P-201ENST00000410457 189 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms