Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AL031121.1-201ENST00000406553 254 ntBASIC3.09□□□□□ -1.91
CDH6P55285 RPL5P18-201ENST00000406671 891 ntBASIC3.09□□□□□ -1.91
CDH6P55285 RNU6-712P-201ENST00000410558 100 ntBASIC3.09□□□□□ -1.91
CDH6P55285 NDUFB4P5-201ENST00000415445 361 ntBASIC3.09□□□□□ -1.91
CDH6P55285 BX664727.1-201ENST00000416024 466 ntBASIC3.09□□□□□ -1.91
CDH6P55285 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH6P55285 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH6P55285 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH6P55285 RPL21P41-201ENST00000459863 264 ntBASIC3.09□□□□□ -1.91
CDH6P55285 AC008379.1-201ENST00000463655 464 ntBASIC3.09□□□□□ -1.91
CDH6P55285 PABPC1P3-201ENST00000469174 459 ntBASIC3.09□□□□□ -1.91
CDH6P55285 AC078857.1-201ENST00000469870 667 ntBASIC3.09□□□□□ -1.91
CDH6P55285 RPS17P11-201ENST00000474297 293 ntBASIC3.09□□□□□ -1.91
CDH6P55285 RPL7P23-201ENST00000493874 747 ntBASIC3.09□□□□□ -1.91
CDH6P55285 AC118282.2-201ENST00000508739 374 ntBASIC3.09□□□□□ -1.91
CDH6P55285 AC048346.1-201ENST00000510247 144 ntBASIC3.09□□□□□ -1.91
CDH6P55285 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH6P55285 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDH6P55285 SNORD84-203ENST00000584275 78 ntBASIC3.09□□□□□ -1.91
CDH6P55285 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH6P55285 AC006539.2-201ENST00000601729 572 ntBASIC3.09□□□□□ -1.91
CDH6P55285 GAS5-AS1-201ENST00000602767 694 ntBASIC3.09□□□□□ -1.91
CDH6P55285 AC092474.3-201ENST00000603022 568 ntBASIC3.09□□□□□ -1.91
CDH6P55285 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH6P55285 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH6P55285 ZNF663P-202ENST00000641770 1131 ntBASIC3.09□□□□□ -1.91
CDH6P55285 MTND5P7-201ENST00000413558 1798 ntBASIC3.09□□□□□ -1.91
CDH6P55285 MTCO1P4-201ENST00000520516 1409 ntBASIC3.09□□□□□ -1.92
CDH6P55285 AP002907.1-201ENST00000606361 1430 ntBASIC3.09□□□□□ -1.92
CDH6P55285 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDH6P55285 AL035425.3-201ENST00000564206 4996 ntBASIC3.08□□□□□ -1.92
CDH6P55285 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.08□□□□□ -1.92
CDH6P55285 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CDH6P55285 MIR208A-201ENST00000362287 71 ntBASIC3.08□□□□□ -1.92
CDH6P55285 SNORD82-201ENST00000365530 70 ntBASIC3.08□□□□□ -1.92
CDH6P55285 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH6P55285 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH6P55285 AL139098.1-201ENST00000407291 389 ntBASIC3.08□□□□□ -1.92
CDH6P55285 RPL7P8-201ENST00000411964 730 ntBASIC3.08□□□□□ -1.92
CDH6P55285 AC099677.1-201ENST00000420575 175 ntBASIC3.08□□□□□ -1.92
CDH6P55285 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.08□□□□□ -1.92
CDH6P55285 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CDH6P55285 AC234064.1-201ENST00000436312 247 ntBASIC3.08□□□□□ -1.92
CDH6P55285 GXYLT1P1-201ENST00000446657 490 ntBASIC3.08□□□□□ -1.92
CDH6P55285 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH6P55285 OR51B8P-201ENST00000449892 769 ntBASIC3.08□□□□□ -1.92
CDH6P55285 RPS29P2-201ENST00000479278 136 ntBASIC3.08□□□□□ -1.92
CDH6P55285 AC096751.1-202ENST00000502691 1067 ntBASIC3.08□□□□□ -1.92
CDH6P55285 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
CDH6P55285 AC109471.1-201ENST00000511631 612 ntBASIC3.08□□□□□ -1.92
CDH6P55285 AC009812.2-201ENST00000517657 457 ntBASIC3.08□□□□□ -1.92
CDH6P55285 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.08□□□□□ -1.92
CDH6P55285 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.08□□□□□ -1.92
CDH6P55285 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.08□□□□□ -1.92
CDH6P55285 AP002404.1-201ENST00000532005 451 ntBASIC3.08□□□□□ -1.92
CDH6P55285 AC126177.3-201ENST00000551839 688 ntBASIC3.08□□□□□ -1.92
CDH6P55285 MIR4506-201ENST00000584693 77 ntBASIC3.08□□□□□ -1.92
CDH6P55285 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH6P55285 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDH6P55285 AL355810.1-201ENST00000614629 552 ntBASIC3.08□□□□□ -1.92
CDH6P55285 AC068831.7-201ENST00000616954 363 ntBASIC3.08□□□□□ -1.92
CDH6P55285 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.08□□□□□ -1.92
CDH6P55285 AC095031.1-201ENST00000623685 672 ntBASIC3.08□□□□□ -1.92
CDH6P55285 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH6P55285 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDH6P55285 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
CDH6P55285 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDH6P55285 SGO1P2-201ENST00000429458 1589 ntBASIC3.08□□□□□ -1.92
CDH6P55285 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDH6P55285 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDH6P55285 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH6P55285 MTND5P19-201ENST00000424872 1794 ntBASIC3.07□□□□□ -1.92
CDH6P55285 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDH6P55285 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH6P55285 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CDH6P55285 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH6P55285 OR1L1-202ENST00000373686 1083 ntBASIC3.07□□□□□ -1.92
CDH6P55285 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.07□□□□□ -1.92
CDH6P55285 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH6P55285 RPL21P32-201ENST00000419877 477 ntBASIC3.07□□□□□ -1.92
CDH6P55285 DEFB130D-201ENST00000426866 237 ntBASIC3.07□□□□□ -1.92
CDH6P55285 RPL17P35-201ENST00000432217 549 ntBASIC3.07□□□□□ -1.92
CDH6P55285 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH6P55285 MTND2P19-201ENST00000449129 1012 ntBASIC3.07□□□□□ -1.92
CDH6P55285 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.07□□□□□ -1.92
CDH6P55285 RNU7-140P-201ENST00000459546 60 ntBASIC3.07□□□□□ -1.92
CDH6P55285 HMGB1P25-201ENST00000468402 607 ntBASIC3.07□□□□□ -1.92
CDH6P55285 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH6P55285 AP004217.1-201ENST00000480579 346 ntBASIC3.07□□□□□ -1.92
CDH6P55285 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.07□□□□□ -1.92
CDH6P55285 OR2A20P-203ENST00000498397 1268 ntBASIC3.07□□□□□ -1.92
CDH6P55285 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.07□□□□□ -1.92
CDH6P55285 POU5F1P7-201ENST00000508759 541 ntBASIC3.07□□□□□ -1.92
CDH6P55285 RNA5SP385-201ENST00000515947 110 ntBASIC3.07□□□□□ -1.92
CDH6P55285 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.07□□□□□ -1.92
CDH6P55285 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.07□□□□□ -1.92
CDH6P55285 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CDH6P55285 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDH6P55285 AC055876.1-202ENST00000567053 138 ntBASIC3.07□□□□□ -1.92
CDH6P55285 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms