Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
NUBP1P53384 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.84□□□□□ -1.32
NUBP1P53384 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.32
NUBP1P53384 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
NUBP1P53384 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.84□□□□□ -1.32
NUBP1P53384 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
NUBP1P53384 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC6.83□□□□□ -1.32
NUBP1P53384 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUBP1P53384 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
NUBP1P53384 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUBP1P53384 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUBP1P53384 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUBP1P53384 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUBP1P53384 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.83□□□□□ -1.32
NUBP1P53384 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
NUBP1P53384 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.83□□□□□ -1.32
NUBP1P53384 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUBP1P53384 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUBP1P53384 SNORD115-8-201ENST00000363856 82 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 SNORD115-38-201ENST00000365037 82 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 RNU6-146P-201ENST00000384602 108 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 U3.22-201ENST00000391120 215 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 MIR1302-4-201ENST00000408701 150 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.83□□□□□ -1.32
NUBP1P53384 AC091390.3-201ENST00000426478 338 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 RN7SL629P-201ENST00000489622 285 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 AP002453.1-201ENST00000492327 668 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 RNU6-941P-201ENST00000516346 108 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 Y_RNA.712-201ENST00000517011 92 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 AC090281.1-201ENST00000523019 276 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 SMILR-201ENST00000533992 553 ntTSL 4 BASIC6.83□□□□□ -1.32
NUBP1P53384 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.83□□□□□ -1.32
NUBP1P53384 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.83□□□□□ -1.32
NUBP1P53384 AC107016.1-201ENST00000550463 337 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.83□□□□□ -1.32
NUBP1P53384 CYCSP38-201ENST00000559840 322 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 AL356157.2-201ENST00000605122 111 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 AL357075.2-201ENST00000614906 189 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 AC004467.1-201ENST00000615678 330 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 AC131238.1-201ENST00000617135 328 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 AL353748.2-201ENST00000622148 471 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 AC039056.2-201ENST00000622261 511 ntBASIC6.83□□□□□ -1.32
NUBP1P53384 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
NUBP1P53384 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.83□□□□□ -1.32
NUBP1P53384 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUBP1P53384 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NUBP1P53384 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUBP1P53384 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
NUBP1P53384 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NUBP1P53384 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NUBP1P53384 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
NUBP1P53384 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.83□□□□□ -1.32
NUBP1P53384 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
NUBP1P53384 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NUBP1P53384 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
NUBP1P53384 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NUBP1P53384 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NUBP1P53384 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NUBP1P53384 HNRNPA1P54-201ENST00000411857 9714 ntBASIC6.82□□□□□ -1.32
NUBP1P53384 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC6.82□□□□□ -1.32
NUBP1P53384 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NUBP1P53384 AC073136.1-201ENST00000449426 2884 ntBASIC6.82□□□□□ -1.32
NUBP1P53384 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
NUBP1P53384 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NUBP1P53384 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
NUBP1P53384 Y_RNA.101-201ENST00000363154 102 ntBASIC6.82□□□□□ -1.32
NUBP1P53384 RNU6-1074P-201ENST00000383995 104 ntBASIC6.82□□□□□ -1.32
NUBP1P53384 AC006461.1-201ENST00000412637 326 ntBASIC6.82□□□□□ -1.32
NUBP1P53384 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.82□□□□□ -1.32
NUBP1P53384 RNU7-107P-201ENST00000459121 61 ntBASIC6.82□□□□□ -1.32
NUBP1P53384 RPL21P126-201ENST00000470049 478 ntBASIC6.82□□□□□ -1.32
NUBP1P53384 RN7SL273P-201ENST00000481561 299 ntBASIC6.82□□□□□ -1.32
NUBP1P53384 AC109810.1-201ENST00000534066 224 ntBASIC6.82□□□□□ -1.32
NUBP1P53384 AL121603.1-201ENST00000553815 142 ntBASIC6.82□□□□□ -1.32
NUBP1P53384 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.82□□□□□ -1.32
NUBP1P53384 AC099669.2-201ENST00000616549 437 ntBASIC6.82□□□□□ -1.32
NUBP1P53384 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.82□□□□□ -1.32
NUBP1P53384 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NUBP1P53384 ATM-215ENST00000530958 5718 ntTSL 2 BASIC6.82□□□□□ -1.32
NUBP1P53384 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NUBP1P53384 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.82□□□□□ -1.32
NUBP1P53384 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
NUBP1P53384 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC6.82□□□□□ -1.32
NUBP1P53384 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.82□□□□□ -1.32
NUBP1P53384 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
NUBP1P53384 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NUBP1P53384 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NUBP1P53384 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NUBP1P53384 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
NUBP1P53384 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NUBP1P53384 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
NUBP1P53384 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC6.82□□□□□ -1.32
NUBP1P53384 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NUBP1P53384 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NUBP1P53384 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.81□□□□□ -1.32
NUBP1P53384 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.81□□□□□ -1.32
NUBP1P53384 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
NUBP1P53384 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NUBP1P53384 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.81□□□□□ -1.32
NUBP1P53384 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms