Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.83□□□□□ -1.8
CLCNKAP51800 AC006130.2-201ENST00000586202 326 ntBASIC3.83□□□□□ -1.8
CLCNKAP51800 RSL24D1P11-201ENST00000591045 491 ntBASIC3.83□□□□□ -1.8
CLCNKAP51800 AC119751.7-201ENST00000600494 245 ntBASIC3.83□□□□□ -1.8
CLCNKAP51800 RN7SKP299-201ENST00000606679 301 ntBASIC3.83□□□□□ -1.8
CLCNKAP51800 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.83□□□□□ -1.8
CLCNKAP51800 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.83□□□□□ -1.8
CLCNKAP51800 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.83□□□□□ -1.8
CLCNKAP51800 AC006927.3-201ENST00000638789 384 ntBASIC3.83□□□□□ -1.8
CLCNKAP51800 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.83□□□□□ -1.8
CLCNKAP51800 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CLCNKAP51800 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCNKAP51800 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCNKAP51800 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCNKAP51800 USP8P1-201ENST00000494673 3183 ntBASIC3.83□□□□□ -1.8
CLCNKAP51800 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLCNKAP51800 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCNKAP51800 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLCNKAP51800 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.82□□□□□ -1.8
CLCNKAP51800 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLCNKAP51800 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.82□□□□□ -1.8
CLCNKAP51800 AL022578.1-201ENST00000439330 1433 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCNKAP51800 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCNKAP51800 U1.1-201ENST00000384101 164 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 MIR134-201ENST00000385258 73 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AC025750.1-201ENST00000399891 379 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 HMGB1P17-201ENST00000403495 628 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLCNKAP51800 RPL21P112-201ENST00000434403 463 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AF228730.2-201ENST00000438784 848 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AC122718.1-201ENST00000439448 744 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 TRIM60P18-201ENST00000441518 828 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.82□□□□□ -1.8
CLCNKAP51800 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCNKAP51800 CDC27P1-201ENST00000445384 715 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 CEACAMP4-201ENST00000457676 421 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 FAM133DP-201ENST00000464802 691 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 PLGLA-201ENST00000465668 449 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 PABPC1P3-201ENST00000469174 459 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.82□□□□□ -1.8
CLCNKAP51800 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLCNKAP51800 RN7SL323P-201ENST00000494712 295 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 RPL31P61-201ENST00000496160 376 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AC010424.1-201ENST00000506336 297 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.82□□□□□ -1.8
CLCNKAP51800 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.82□□□□□ -1.8
CLCNKAP51800 TMEM248P1-201ENST00000510579 951 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 Y_RNA.655-201ENST00000515919 96 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 SNORA70.14-201ENST00000516205 110 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 RNA5SP164-201ENST00000516533 110 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCNKAP51800 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCNKAP51800 OR4A45P-201ENST00000529954 901 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.82□□□□□ -1.8
CLCNKAP51800 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.82□□□□□ -1.8
CLCNKAP51800 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.82□□□□□ -1.8
CLCNKAP51800 AC012414.6-201ENST00000568241 401 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 MIR4644-201ENST00000579929 84 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AC025588.3-201ENST00000604182 274 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AC112230.1-201ENST00000604342 547 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AC064872.1-201ENST00000604823 1072 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCNKAP51800 AC128687.2-201ENST00000609657 566 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCNKAP51800 AC025588.4-201ENST00000615802 908 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCNKAP51800 AC009318.4-201ENST00000620496 486 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AC048347.1-201ENST00000624621 427 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.82□□□□□ -1.8
CLCNKAP51800 LINC02471-203ENST00000641941 4752 ntBASIC3.82□□□□□ -1.8
CLCNKAP51800 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCNKAP51800 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCNKAP51800 MTCO1P23-201ENST00000415223 1526 ntBASIC3.81□□□□□ -1.8
CLCNKAP51800 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CLCNKAP51800 RNU6-289P-201ENST00000364093 107 ntBASIC3.81□□□□□ -1.8
CLCNKAP51800 RN7SKP142-201ENST00000411236 328 ntBASIC3.81□□□□□ -1.8
CLCNKAP51800 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.81□□□□□ -1.8
CLCNKAP51800 HMGB1P11-201ENST00000413899 637 ntBASIC3.81□□□□□ -1.8
CLCNKAP51800 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCNKAP51800 AL049610.1-201ENST00000423374 372 ntBASIC3.81□□□□□ -1.8
CLCNKAP51800 CYCSP46-201ENST00000423569 204 ntBASIC3.81□□□□□ -1.8
CLCNKAP51800 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.81□□□□□ -1.8
CLCNKAP51800 KCTD9P3-201ENST00000434597 1169 ntBASIC3.81□□□□□ -1.8
CLCNKAP51800 AL512286.1-201ENST00000439244 400 ntBASIC3.81□□□□□ -1.8
CLCNKAP51800 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCNKAP51800 AL831737.1-201ENST00000441288 271 ntBASIC3.81□□□□□ -1.8
CLCNKAP51800 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCNKAP51800 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.81□□□□□ -1.8
CLCNKAP51800 ANP32BP2-201ENST00000454525 545 ntBASIC3.81□□□□□ -1.8
CLCNKAP51800 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCNKAP51800 RNF138P1-201ENST00000502765 546 ntBASIC3.81□□□□□ -1.8
CLCNKAP51800 AC093767.1-201ENST00000504523 156 ntBASIC3.81□□□□□ -1.8
CLCNKAP51800 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
CLCNKAP51800 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.81□□□□□ -1.8
CLCNKAP51800 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCNKAP51800 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCNKAP51800 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCNKAP51800 RNA5SP216-201ENST00000516111 123 ntBASIC3.81□□□□□ -1.8
CLCNKAP51800 RNU6-352P-201ENST00000516908 107 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms