Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 U1.39-201ENST00000621562 146 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.8□□□□□ -1.96
CXCL12P48061 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.8□□□□□ -1.96
CXCL12P48061 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CXCL12P48061 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.8□□□□□ -1.96
CXCL12P48061 SAGE4P-201ENST00000442271 3381 ntBASIC2.8□□□□□ -1.96
CXCL12P48061 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CXCL12P48061 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.79□□□□□ -1.96
CXCL12P48061 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.79□□□□□ -1.96
CXCL12P48061 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CXCL12P48061 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CXCL12P48061 RNU1-75P-201ENST00000347264 129 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CXCL12P48061 AP002088.1-201ENST00000382740 395 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 RNU6-354P-201ENST00000383862 107 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 RNU6-610P-201ENST00000384264 107 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 SNORA51.12-201ENST00000384448 134 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 MIR504-201ENST00000385065 83 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 RPL22P22-201ENST00000395439 379 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 DNAJC19P6-201ENST00000401853 280 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 RN7SKP285-201ENST00000410137 318 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 RNU6-272P-201ENST00000411028 104 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 RNA5SP31-201ENST00000411144 127 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 BMS1P22-201ENST00000414726 313 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 PAICSP7-201ENST00000419829 962 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 DEFB130D-201ENST00000426866 237 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 UBE2V1P6-201ENST00000430840 422 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 BX679664.1-201ENST00000434429 253 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.79□□□□□ -1.96
CXCL12P48061 BX248409.1-201ENST00000455497 255 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.79□□□□□ -1.96
CXCL12P48061 RPS3P1-201ENST00000456781 192 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 snoU13.26-201ENST00000459452 105 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 RPS17P11-201ENST00000474297 293 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 AC078918.1-201ENST00000498515 228 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.79□□□□□ -1.96
CXCL12P48061 RNU6-202P-201ENST00000515998 96 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 RNU6-416P-201ENST00000516265 103 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 RN7SKP277-201ENST00000516895 283 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
CXCL12P48061 AC011611.5-201ENST00000552477 578 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.79□□□□□ -1.96
CXCL12P48061 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.79□□□□□ -1.96
CXCL12P48061 AC124283.4-201ENST00000581815 456 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.79□□□□□ -1.96
CXCL12P48061 AC011492.1-201ENST00000600023 315 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 AL365400.2-201ENST00000605604 902 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 AC016877.3-201ENST00000606778 504 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.79□□□□□ -1.96
CXCL12P48061 AC004832.5-201ENST00000608677 401 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 AC084824.5-201ENST00000612009 413 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 AC106730.3-201ENST00000624568 641 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 AL109659.3-201ENST00000624985 950 ntBASIC2.79□□□□□ -1.96
CXCL12P48061 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.79□□□□□ -1.96
CXCL12P48061 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
CXCL12P48061 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL12P48061 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL12P48061 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL12P48061 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.78□□□□□ -1.96
CXCL12P48061 U8.2-201ENST00000363156 134 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 RNU6-77P-201ENST00000410554 91 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.78□□□□□ -1.96
CXCL12P48061 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.78□□□□□ -1.96
CXCL12P48061 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.78□□□□□ -1.96
CXCL12P48061 RPL36P19-201ENST00000430744 301 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.78□□□□□ -1.96
CXCL12P48061 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.78□□□□□ -1.96
CXCL12P48061 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.78□□□□□ -1.96
CXCL12P48061 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.78□□□□□ -1.96
CXCL12P48061 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.78□□□□□ -1.96
CXCL12P48061 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.78□□□□□ -1.96
CXCL12P48061 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.78□□□□□ -1.96
CXCL12P48061 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC2.78□□□□□ -1.96
CXCL12P48061 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.78□□□□□ -1.96
CXCL12P48061 RNU6-467P-201ENST00000517027 110 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.78□□□□□ -1.96
CXCL12P48061 IGJP1-201ENST00000522682 475 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 AP001636.2-201ENST00000525517 696 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL12P48061 AC011602.1-201ENST00000546484 331 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.78□□□□□ -1.96
CXCL12P48061 MTND4LP25-201ENST00000570218 163 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 MIR4789-201ENST00000577469 82 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 VN1R88P-201ENST00000596787 292 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 RMST_8.1-201ENST00000610287 165 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 AC105429.2-201ENST00000610567 517 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 AC006111.3-201ENST00000622137 383 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.78□□□□□ -1.96
CXCL12P48061 AC009039.2-201ENST00000624524 529 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 MIR7153-201ENST00000637758 57 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 FAM157B-203ENST00000639350 358 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.78□□□□□ -1.96
CXCL12P48061 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CXCL12P48061 ZNF849P-201ENST00000594711 1566 ntBASIC2.78□□□□□ -1.96
CXCL12P48061 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CXCL12P48061 MTCO1P6-201ENST00000481192 1384 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 AC107081.3-201ENST00000612715 2034 ntBASIC2.77□□□□□ -1.97
CXCL12P48061 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms