Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.14□□□□□ -1.59
CCNFP41002 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.14□□□□□ -1.59
CCNFP41002 RPS21P4-201ENST00000487122 248 ntBASIC5.14□□□□□ -1.59
CCNFP41002 RPS4XP20-201ENST00000505751 772 ntBASIC5.14□□□□□ -1.59
CCNFP41002 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.14□□□□□ -1.59
CCNFP41002 HIGD1AP3-201ENST00000515857 278 ntBASIC5.14□□□□□ -1.59
CCNFP41002 Y_RNA.665-201ENST00000516177 98 ntBASIC5.14□□□□□ -1.59
CCNFP41002 RNU6-273P-201ENST00000516937 96 ntBASIC5.14□□□□□ -1.59
CCNFP41002 AC012400.1-201ENST00000518452 381 ntBASIC5.14□□□□□ -1.59
CCNFP41002 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.14□□□□□ -1.59
CCNFP41002 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.14□□□□□ -1.59
CCNFP41002 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.14□□□□□ -1.59
CCNFP41002 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCNFP41002 MIR4775-201ENST00000581168 75 ntBASIC5.14□□□□□ -1.59
CCNFP41002 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.14□□□□□ -1.59
CCNFP41002 AC021646.1-201ENST00000605469 484 ntBASIC5.14□□□□□ -1.59
CCNFP41002 AL512329.2-201ENST00000607350 548 ntBASIC5.14□□□□□ -1.59
CCNFP41002 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
CCNFP41002 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CCNFP41002 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCNFP41002 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCNFP41002 MTND4P14-201ENST00000435799 1354 ntBASIC5.14□□□□□ -1.59
CCNFP41002 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CCNFP41002 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCNFP41002 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCNFP41002 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.14□□□□□ -1.59
CCNFP41002 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCNFP41002 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.13□□□□□ -1.59
CCNFP41002 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
CCNFP41002 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CCNFP41002 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CCNFP41002 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCNFP41002 NXPH1-205ENST00000602349 1953 ntBASIC5.13□□□□□ -1.59
CCNFP41002 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCNFP41002 Y_RNA.100-201ENST00000363141 102 ntBASIC5.13□□□□□ -1.59
CCNFP41002 Y_RNA.132-201ENST00000363421 102 ntBASIC5.13□□□□□ -1.59
CCNFP41002 RNA5SP90-201ENST00000364801 99 ntBASIC5.13□□□□□ -1.59
CCNFP41002 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCNFP41002 RNU6-38P-201ENST00000384085 107 ntBASIC5.13□□□□□ -1.59
CCNFP41002 RNU6-432P-201ENST00000384196 109 ntBASIC5.13□□□□□ -1.59
CCNFP41002 Y_RNA.474-201ENST00000384341 102 ntBASIC5.13□□□□□ -1.59
CCNFP41002 MIR514A2-201ENST00000385131 88 ntBASIC5.13□□□□□ -1.59
CCNFP41002 MIR514A3-201ENST00000385132 88 ntBASIC5.13□□□□□ -1.59
CCNFP41002 AL136372.1-201ENST00000403060 228 ntBASIC5.13□□□□□ -1.59
CCNFP41002 RNU2-36P-201ENST00000410361 191 ntBASIC5.13□□□□□ -1.59
CCNFP41002 RNU6-516P-201ENST00000411381 104 ntBASIC5.13□□□□□ -1.59
CCNFP41002 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.13□□□□□ -1.59
CCNFP41002 OR6C66P-201ENST00000414917 930 ntBASIC5.13□□□□□ -1.59
CCNFP41002 MTND2P23-201ENST00000422990 651 ntBASIC5.13□□□□□ -1.59
CCNFP41002 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.13□□□□□ -1.59
CCNFP41002 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.13□□□□□ -1.59
CCNFP41002 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.13□□□□□ -1.59
CCNFP41002 Z92846.1-201ENST00000456203 268 ntBASIC5.13□□□□□ -1.59
CCNFP41002 AL162395.1-201ENST00000457882 422 ntBASIC5.13□□□□□ -1.59
CCNFP41002 RNU6-333P-201ENST00000459117 107 ntBASIC5.13□□□□□ -1.59
CCNFP41002 ST13P14-201ENST00000474095 734 ntBASIC5.13□□□□□ -1.59
CCNFP41002 RPS15AP36-201ENST00000492022 382 ntBASIC5.13□□□□□ -1.59
CCNFP41002 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.13□□□□□ -1.59
CCNFP41002 AC024558.1-201ENST00000505008 528 ntBASIC5.13□□□□□ -1.59
CCNFP41002 RNU6-64P-201ENST00000517119 105 ntBASIC5.13□□□□□ -1.59
CCNFP41002 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.13□□□□□ -1.59
CCNFP41002 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.13□□□□□ -1.59
CCNFP41002 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.13□□□□□ -1.59
CCNFP41002 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.13□□□□□ -1.59
CCNFP41002 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.13□□□□□ -1.59
CCNFP41002 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.13□□□□□ -1.59
CCNFP41002 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCNFP41002 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.13□□□□□ -1.59
CCNFP41002 MIR6826-201ENST00000617808 98 ntBASIC5.13□□□□□ -1.59
CCNFP41002 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.13□□□□□ -1.59
CCNFP41002 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.13□□□□□ -1.59
CCNFP41002 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.13□□□□□ -1.59
CCNFP41002 CYP4F35P-202ENST00000636121 390 ntBASIC5.13□□□□□ -1.59
CCNFP41002 AC135068.12-201ENST00000637370 931 ntBASIC5.13□□□□□ -1.59
CCNFP41002 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.13□□□□□ -1.59
CCNFP41002 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCNFP41002 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.13□□□□□ -1.59
CCNFP41002 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CCNFP41002 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCNFP41002 MTND4P27-201ENST00000450813 1354 ntBASIC5.13□□□□□ -1.59
CCNFP41002 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCNFP41002 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.13□□□□□ -1.59
CCNFP41002 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.13□□□□□ -1.59
CCNFP41002 MTCO1P9-201ENST00000505577 1534 ntBASIC5.13□□□□□ -1.59
CCNFP41002 TAB3P1-202ENST00000452645 1634 ntBASIC5.12□□□□□ -1.59
CCNFP41002 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.12□□□□□ -1.59
CCNFP41002 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CCNFP41002 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCNFP41002 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCNFP41002 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CCNFP41002 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.12□□□□□ -1.59
CCNFP41002 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.12□□□□□ -1.59
CCNFP41002 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCNFP41002 RNU6-179P-201ENST00000363350 107 ntBASIC5.12□□□□□ -1.59
CCNFP41002 RNU6-511P-201ENST00000363496 107 ntBASIC5.12□□□□□ -1.59
CCNFP41002 Y_RNA.259-201ENST00000364619 101 ntBASIC5.12□□□□□ -1.59
CCNFP41002 SNORA70E-201ENST00000384492 135 ntBASIC5.12□□□□□ -1.59
CCNFP41002 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCNFP41002 RN7SKP159-201ENST00000410657 292 ntBASIC5.12□□□□□ -1.59
CCNFP41002 RNA5SP107-201ENST00000411358 122 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms