Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXC12P31275 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC12P31275 RPL23AP33-201ENST00000442301 452 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC12P31275 AL590399.6-201ENST00000446396 307 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXC12P31275 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXC12P31275 RNU7-180P-201ENST00000459240 63 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.8□□□□□ -1.64
HOXC12P31275 RPS17P5-201ENST00000498293 408 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC12P31275 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC12P31275 OR51K1P-201ENST00000510214 950 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 MTND4P7-201ENST00000523876 130 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.8□□□□□ -1.64
HOXC12P31275 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HOXC12P31275 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC12P31275 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC12P31275 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC12P31275 MIR3691-201ENST00000578066 90 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 AP005403.1-201ENST00000579720 229 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC12P31275 MIR4424-201ENST00000585257 86 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC12P31275 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC12P31275 AC113139.1-201ENST00000605049 239 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.8□□□□□ -1.64
HOXC12P31275 AC126915.2-201ENST00000610957 190 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC12P31275 AC100827.5-201ENST00000615883 426 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 uc_338.34-201ENST00000617467 174 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 U73479.1-201ENST00000618062 168 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 uc_338.7-201ENST00000621834 124 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 MIR6810-201ENST00000622701 70 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC12P31275 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC12P31275 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXC12P31275 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXC12P31275 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC12P31275 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HOXC12P31275 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC12P31275 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXC12P31275 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HOXC12P31275 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HOXC12P31275 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HOXC12P31275 AL645937.1-201ENST00000641739 1652 ntBASIC4.8□□□□□ -1.64
HOXC12P31275 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
HOXC12P31275 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
HOXC12P31275 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXC12P31275 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HOXC12P31275 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC12P31275 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC12P31275 RNU6-1287P-201ENST00000362914 107 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 RNU6-1284P-201ENST00000363701 100 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 RNU6-61P-201ENST00000365528 109 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC12P31275 RNU6-1060P-201ENST00000384664 107 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 MIR153-1-201ENST00000384914 90 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HOXC12P31275 RNU1-77P-201ENST00000390868 162 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC12P31275 AC013442.1-201ENST00000397347 228 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 UBE2V1P2-201ENST00000397758 440 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 AL590004.1-201ENST00000405321 300 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC12P31275 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC12P31275 ARL5AP1-201ENST00000418991 388 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 HSPE1P1-201ENST00000421494 318 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXC12P31275 CKS1BP5-201ENST00000434172 273 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 CEACAMP6-201ENST00000452007 574 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 AL513533.1-201ENST00000453728 415 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXC12P31275 RPS27AP1-201ENST00000475545 471 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC12P31275 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 RPL7P23-201ENST00000493874 747 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 CEACAMP10-202ENST00000495431 496 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXC12P31275 AC104806.1-201ENST00000508720 308 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 FAM206BP-201ENST00000510179 541 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 Y_RNA.691-201ENST00000516611 103 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC12P31275 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXC12P31275 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXC12P31275 AC126177.5-201ENST00000549599 178 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXC12P31275 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC12P31275 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXC12P31275 AC009962.1-201ENST00000567327 3813 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HOXC12P31275 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HOXC12P31275 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXC12P31275 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXC12P31275 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXC12P31275 AL133255.1-201ENST00000606374 441 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 AP001521.2-201ENST00000608772 546 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 TUG1_2.1-201ENST00000614234 87 ntBASIC4.79□□□□□ -1.64
HOXC12P31275 AL353662.3-201ENST00000625131 237 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms