Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 SNX18P1Y-201ENST00000616231 511 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LMNB1P20700 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LMNB1P20700 DDX18P3-201ENST00000404856 2007 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LMNB1P20700 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
LMNB1P20700 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LMNB1P20700 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LMNB1P20700 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 MAPK10-328ENST00000641553 4009 ntBASIC5.73□□□□□ -1.49
LMNB1P20700 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LMNB1P20700 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LMNB1P20700 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LMNB1P20700 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LMNB1P20700 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
LMNB1P20700 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.72□□□□□ -1.49
LMNB1P20700 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LMNB1P20700 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
LMNB1P20700 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
LMNB1P20700 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
LMNB1P20700 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LMNB1P20700 RNA5SP366-201ENST00000365454 123 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
LMNB1P20700 MIR554-201ENST00000384874 96 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 MIR1-2-201ENST00000384961 85 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 RNU6-332P-201ENST00000391193 108 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LMNB1P20700 RNU6-628P-201ENST00000410675 107 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 RN7SKP247-201ENST00000411094 308 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.72□□□□□ -1.49
LMNB1P20700 RPL36AP53-201ENST00000432891 316 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.72□□□□□ -1.49
LMNB1P20700 CACYBPP2-201ENST00000453625 678 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.72□□□□□ -1.49
LMNB1P20700 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.72□□□□□ -1.49
LMNB1P20700 AC233702.1-201ENST00000482905 502 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.72□□□□□ -1.49
LMNB1P20700 AC073073.1-201ENST00000493920 463 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 AC093278.1-201ENST00000494700 600 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 FTH1P24-201ENST00000503502 462 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.72□□□□□ -1.49
LMNB1P20700 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.72□□□□□ -1.49
LMNB1P20700 Y_RNA.719-201ENST00000517156 106 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 AP000827.1-201ENST00000527814 258 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.72□□□□□ -1.49
LMNB1P20700 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.72□□□□□ -1.49
LMNB1P20700 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.72□□□□□ -1.49
LMNB1P20700 AC078795.3-201ENST00000602913 472 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 AL050343.2-201ENST00000607338 280 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 AC112200.1-201ENST00000625015 234 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.72□□□□□ -1.49
LMNB1P20700 MUC2-202ENST00000613187 4845 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LMNB1P20700 ZFRP1-201ENST00000457579 2970 ntBASIC5.72□□□□□ -1.49
LMNB1P20700 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LMNB1P20700 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LMNB1P20700 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
LMNB1P20700 AC112198.2-201ENST00000426589 6996 ntBASIC5.71□□□□□ -1.49
LMNB1P20700 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LMNB1P20700 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
LMNB1P20700 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LMNB1P20700 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LMNB1P20700 SPRR2C-201ENST00000290702 219 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 RPL7P26-201ENST00000333817 754 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 MIR208A-201ENST00000362287 71 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 RNU4-79P-201ENST00000362764 141 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 RNU6-1207P-201ENST00000384343 107 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 AL590762.2-201ENST00000395798 571 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 AL591416.1-201ENST00000404015 867 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 AL354719.1-201ENST00000406535 843 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 FAT1P1-201ENST00000406588 507 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 AC069218.2-201ENST00000411665 344 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.71□□□□□ -1.5
LMNB1P20700 RPL12P9-201ENST00000412942 488 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.71□□□□□ -1.5
LMNB1P20700 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.71□□□□□ -1.5
LMNB1P20700 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.71□□□□□ -1.5
LMNB1P20700 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.71□□□□□ -1.5
LMNB1P20700 snoU13.7-201ENST00000459220 104 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 RN7SL98P-201ENST00000462271 300 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 RN7SL132P-201ENST00000478131 296 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 PCBP2P3-201ENST00000509726 843 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.71□□□□□ -1.5
LMNB1P20700 SCARNA24.1-201ENST00000516465 137 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 RNA5SP337-201ENST00000517007 109 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 AP003072.2-201ENST00000527756 676 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.71□□□□□ -1.5
LMNB1P20700 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.71□□□□□ -1.5
LMNB1P20700 AL359219.2-201ENST00000555184 348 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.71□□□□□ -1.5
LMNB1P20700 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 AC233309.1-201ENST00000619522 751 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 AC009318.4-201ENST00000620496 486 ntBASIC5.71□□□□□ -1.5
LMNB1P20700 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
LMNB1P20700 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LMNB1P20700 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
LMNB1P20700 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
LMNB1P20700 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.71□□□□□ -1.5
LMNB1P20700 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LMNB1P20700 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms