Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RNU2-27P-201ENST00000516185 142 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 RNU6-314P-201ENST00000516574 104 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 AC022882.1-201ENST00000532142 501 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.58□□□□□ -1.68
COL3A1P02461 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.58□□□□□ -1.68
COL3A1P02461 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.58□□□□□ -1.68
COL3A1P02461 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.58□□□□□ -1.68
COL3A1P02461 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.58□□□□□ -1.68
COL3A1P02461 AC104260.1-201ENST00000616660 539 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 AC025048.6-202ENST00000627667 438 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL3A1P02461 ZNF680P1-201ENST00000436625 1469 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 NMD3P1-201ENST00000439704 1488 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
COL3A1P02461 MTND4P12-201ENST00000498999 1377 ntBASIC4.58□□□□□ -1.68
COL3A1P02461 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.58□□□□□ -1.68
COL3A1P02461 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL3A1P02461 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.57□□□□□ -1.68
COL3A1P02461 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
COL3A1P02461 RNU1-70P-201ENST00000362618 164 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL3A1P02461 Z92545.1-201ENST00000411782 234 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL3A1P02461 VTA1P1-201ENST00000414044 866 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 AC138393.2-201ENST00000414742 246 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.57□□□□□ -1.68
COL3A1P02461 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL3A1P02461 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.57□□□□□ -1.68
COL3A1P02461 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.57□□□□□ -1.68
COL3A1P02461 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 MTATP6P30-201ENST00000443540 664 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.57□□□□□ -1.68
COL3A1P02461 DNAJC19P1-201ENST00000455312 319 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 MTND1P11-201ENST00000456661 876 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.57□□□□□ -1.68
COL3A1P02461 AC023598.1-201ENST00000472521 361 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 AL358832.1-201ENST00000497800 389 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 AC147055.4-201ENST00000504399 745 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 ARL4AP2-201ENST00000507378 601 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.57□□□□□ -1.68
COL3A1P02461 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.57□□□□□ -1.68
COL3A1P02461 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.57□□□□□ -1.68
COL3A1P02461 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.57□□□□□ -1.68
COL3A1P02461 AC074029.1-201ENST00000552531 1044 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.57□□□□□ -1.68
COL3A1P02461 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.57□□□□□ -1.68
COL3A1P02461 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.57□□□□□ -1.68
COL3A1P02461 MIR5186-201ENST00000577504 120 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.57□□□□□ -1.68
COL3A1P02461 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.57□□□□□ -1.68
COL3A1P02461 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.57□□□□□ -1.68
COL3A1P02461 Y_RNA.804-201ENST00000615262 101 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 AC006338.1-201ENST00000618453 749 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 AC244205.2-202ENST00000635781 342 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 LRRC77P-213ENST00000637727 880 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 MFSD8-245ENST00000641743 948 ntBASIC4.57□□□□□ -1.68
COL3A1P02461 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.57□□□□□ -1.68
COL3A1P02461 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.57□□□□□ -1.68
COL3A1P02461 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.57□□□□□ -1.68
COL3A1P02461 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL3A1P02461 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.57□□□□□ -1.68
COL3A1P02461 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL3A1P02461 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
COL3A1P02461 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
COL3A1P02461 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL3A1P02461 RNU6-353P-201ENST00000364266 108 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.56□□□□□ -1.68
COL3A1P02461 Z99755.1-201ENST00000414048 380 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 AC012498.1-201ENST00000424037 437 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.56□□□□□ -1.68
COL3A1P02461 AC000111.3-201ENST00000433478 193 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 RAB9AP5-201ENST00000437794 597 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 RAB9AP2-201ENST00000443911 597 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.56□□□□□ -1.68
COL3A1P02461 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.56□□□□□ -1.68
COL3A1P02461 RN7SL601P-201ENST00000471221 293 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 AC072039.1-201ENST00000477611 581 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 ACTG1P13-201ENST00000486987 1043 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 MTND5P5-201ENST00000503764 376 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 AC010587.2-201ENST00000511727 448 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.56□□□□□ -1.68
COL3A1P02461 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.56□□□□□ -1.68
COL3A1P02461 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.56□□□□□ -1.68
COL3A1P02461 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.56□□□□□ -1.68
COL3A1P02461 AP001542.2-201ENST00000593141 364 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 BMS1P7-201ENST00000602440 1052 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 AC009220.3-201ENST00000604318 586 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 AP000860.1-201ENST00000605250 559 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 AC087045.1-201ENST00000605856 382 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 AL390208.1-201ENST00000605885 644 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.56□□□□□ -1.68
COL3A1P02461 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.56□□□□□ -1.68
COL3A1P02461 MIR7851-201ENST00000610611 160 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 RMST_5.1-201ENST00000618704 126 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 DUXAP9-208ENST00000622815 614 ntBASIC4.56□□□□□ -1.68
COL3A1P02461 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.56□□□□□ -1.68
COL3A1P02461 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
COL3A1P02461 OR5H6-203ENST00000642105 978 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms