Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 RPS3AP26-201ENST00000398259 784 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 RPL30P2-201ENST00000414021 291 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 TATDN1P1-201ENST00000414123 891 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 BTF3P8-201ENST00000414577 526 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 MTND4P3-201ENST00000417829 541 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.62□□□□□ -1.83
COL2A1P02458 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.62□□□□□ -1.83
COL2A1P02458 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.62□□□□□ -1.83
COL2A1P02458 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.62□□□□□ -1.83
COL2A1P02458 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.62□□□□□ -1.83
COL2A1P02458 AC133473.1-201ENST00000455173 299 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.62□□□□□ -1.83
COL2A1P02458 AC010401.1-201ENST00000463867 348 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 SYPL1P1-201ENST00000473622 768 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.62□□□□□ -1.83
COL2A1P02458 RN7SL432P-201ENST00000484057 298 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.62□□□□□ -1.83
COL2A1P02458 AC021146.8-201ENST00000507455 733 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.62□□□□□ -1.83
COL2A1P02458 AC093770.1-201ENST00000511559 571 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 RNU1-143P-201ENST00000516296 146 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 RNU6-1028P-201ENST00000517164 93 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.62□□□□□ -1.83
COL2A1P02458 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.62□□□□□ -1.83
COL2A1P02458 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.62□□□□□ -1.83
COL2A1P02458 ELOCP32-201ENST00000548625 324 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.62□□□□□ -1.83
COL2A1P02458 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.62□□□□□ -1.83
COL2A1P02458 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.62□□□□□ -1.83
COL2A1P02458 AC234778.2-201ENST00000566241 354 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.62□□□□□ -1.83
COL2A1P02458 AC078795.2-201ENST00000602835 1252 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 AL035411.2-201ENST00000604022 421 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.62□□□□□ -1.83
COL2A1P02458 U1.23-201ENST00000610293 146 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 RNU1-68P-201ENST00000615382 146 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 U1.39-201ENST00000621562 146 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.62□□□□□ -1.83
COL2A1P02458 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.62□□□□□ -1.83
COL2A1P02458 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.62□□□□□ -1.83
COL2A1P02458 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 AL359715.4-201ENST00000606629 1436 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
COL2A1P02458 AC008432.1-201ENST00000615912 1320 ntBASIC3.62□□□□□ -1.83
COL2A1P02458 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
COL2A1P02458 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
COL2A1P02458 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
COL2A1P02458 Y_RNA.3-201ENST00000362331 103 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 TAF9BP2-201ENST00000400856 499 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.61□□□□□ -1.83
COL2A1P02458 MTND1P4-201ENST00000435196 415 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 ARL5AP3-201ENST00000439327 386 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.61□□□□□ -1.83
COL2A1P02458 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL2A1P02458 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.61□□□□□ -1.83
COL2A1P02458 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.61□□□□□ -1.83
COL2A1P02458 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.61□□□□□ -1.83
COL2A1P02458 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.61□□□□□ -1.83
COL2A1P02458 AC021146.1-201ENST00000511202 716 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.61□□□□□ -1.83
COL2A1P02458 RNU6-232P-201ENST00000517144 64 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 MTND4LP18-201ENST00000526864 291 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 NDUFS5P6-201ENST00000529136 295 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 AC087897.1-201ENST00000550134 156 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.61□□□□□ -1.83
COL2A1P02458 AC006362.1-201ENST00000567392 174 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 CBX3P2-202ENST00000583365 535 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.61□□□□□ -1.83
COL2A1P02458 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.61□□□□□ -1.83
COL2A1P02458 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.61□□□□□ -1.83
COL2A1P02458 AL590229.1-201ENST00000603497 542 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 AP000811.1-201ENST00000603803 651 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 AC010738.1-201ENST00000604970 987 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 AC024060.1-201ENST00000607052 494 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 AL135786.2-201ENST00000608422 615 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.61□□□□□ -1.83
COL2A1P02458 AC009237.15-201ENST00000610252 501 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 RMST_8.1-201ENST00000610287 165 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.61□□□□□ -1.83
COL2A1P02458 AC015540.1-201ENST00000615828 501 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 AC010975.3-201ENST00000618727 978 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 AC091903.1-201ENST00000624322 454 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL2A1P02458 MIR1322-201ENST00000638013 71 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 AL136360.1-201ENST00000503377 1900 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 AC026523.2-201ENST00000625039 7739 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 AL049737.1-201ENST00000413920 1403 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 HSPA8P1-201ENST00000425843 1833 ntBASIC3.61□□□□□ -1.83
COL2A1P02458 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
COL2A1P02458 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
COL2A1P02458 RNU6-252P-201ENST00000363232 107 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 SNORD113-6-201ENST00000363345 75 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.6□□□□□ -1.83
COL2A1P02458 Y_RNA.517-201ENST00000384551 106 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
COL2A1P02458 AL590084.1-201ENST00000407885 387 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 RPL7P8-201ENST00000411964 730 ntBASIC3.6□□□□□ -1.83
COL2A1P02458 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.6□□□□□ -1.83
COL2A1P02458 AL365203.2-201ENST00000423444 196 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms