Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 Y_RNA.450-201ENST00000384198 113 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 CALM2P3-201ENST00000400429 449 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 MTND4LP20-201ENST00000402379 270 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 AL356421.1-201ENST00000403255 413 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 AL359704.1-201ENST00000411586 781 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS4BO75351 RPS12P5-201ENST00000423449 371 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS4BO75351 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS4BO75351 AL049734.2-201ENST00000441066 616 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 MTATP6P30-201ENST00000443540 664 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 BX276092.4-201ENST00000452056 248 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS4BO75351 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS4BO75351 AC006499.6-201ENST00000511169 607 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 ARL2BPP6-201ENST00000512757 439 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
VPS4BO75351 RN7SKP277-201ENST00000516895 283 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.39□□□□□ -1.71
VPS4BO75351 AP001893.2-201ENST00000526949 202 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS4BO75351 AC090615.1-201ENST00000577519 154 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS4BO75351 AC067852.4-201ENST00000590314 478 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 OR10AB1P-201ENST00000609613 938 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS4BO75351 MIR6863-201ENST00000636112 90 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 MIR3688-2-201ENST00000636963 87 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
VPS4BO75351 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS4BO75351 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 AC108467.2-201ENST00000617640 1597 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 AC009951.1-201ENST00000623674 2614 ntBASIC4.39□□□□□ -1.71
VPS4BO75351 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS4BO75351 AC087190.4-201ENST00000574616 8334 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS4BO75351 ZNF137P-201ENST00000456718 1920 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 AC139769.1-204ENST00000472297 1931 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VPS4BO75351 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS4BO75351 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS4BO75351 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS4BO75351 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS4BO75351 Y_RNA.9-201ENST00000362354 101 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 RNA5SP307-201ENST00000362863 116 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 RNU4-1-201ENST00000363925 141 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 RNA5SP509-201ENST00000364577 119 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 Y_RNA.256-201ENST00000364594 104 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 SNORA71.2-201ENST00000364941 134 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 MIR708-201ENST00000390708 88 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 U3.29-201ENST00000391296 212 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 RSU1P3-201ENST00000412878 835 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS4BO75351 UQCRBP1-201ENST00000421129 336 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 AC008065.1-201ENST00000428525 348 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS4BO75351 AL358934.1-201ENST00000432346 324 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 AC108734.1-201ENST00000439549 399 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS4BO75351 Z99127.3-201ENST00000448158 395 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 RPL38P1-201ENST00000460914 211 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 AC011276.1-201ENST00000469688 323 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS4BO75351 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS4BO75351 ARL4AP2-201ENST00000507378 601 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS4BO75351 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS4BO75351 OR5BC1P-201ENST00000529327 739 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS4BO75351 CENPUP2-201ENST00000555897 1186 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 AP005205.1-201ENST00000563503 508 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS4BO75351 MTCO3P24-201ENST00000572729 782 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS4BO75351 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS4BO75351 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS4BO75351 U3.53-201ENST00000628922 216 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS4BO75351 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS4BO75351 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS4BO75351 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS4BO75351 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS4BO75351 AC007390.2-201ENST00000606229 3803 ntBASIC4.38□□□□□ -1.71
VPS4BO75351 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS4BO75351 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
VPS4BO75351 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS4BO75351 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS4BO75351 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS4BO75351 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VPS4BO75351 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS4BO75351 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS4BO75351 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS4BO75351 OR56B2P-202ENST00000641377 2453 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms