Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.37□□□□□ -1.87
NPHP4O75161 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.37□□□□□ -1.87
NPHP4O75161 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.37□□□□□ -1.87
NPHP4O75161 AC012119.1-201ENST00000603184 222 ntBASIC3.37□□□□□ -1.87
NPHP4O75161 SCARNA17.4-201ENST00000614296 143 ntBASIC3.37□□□□□ -1.87
NPHP4O75161 AL162233.1-201ENST00000620014 944 ntBASIC3.37□□□□□ -1.87
NPHP4O75161 AC084035.1-201ENST00000634543 607 ntBASIC3.37□□□□□ -1.87
NPHP4O75161 RN7SKP32-201ENST00000410167 303 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 RPL31P45-201ENST00000419532 356 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 RNU6-1053P-201ENST00000515930 101 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 AP001207.1-201ENST00000524051 481 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 AP000857.1-201ENST00000532151 543 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 AC074029.2-201ENST00000551045 634 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 MIR4512-201ENST00000583257 77 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPHP4O75161 AC099778.2-201ENST00000610904 211 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.36□□□□□ -1.87
NPHP4O75161 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NPHP4O75161 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.36□□□□□ -1.87
NPHP4O75161 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPHP4O75161 AC007342.9-201ENST00000623877 1385 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 XIAPP3-201ENST00000312918 795 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 RNA5SP88-201ENST00000365560 109 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPHP4O75161 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.36□□□□□ -1.87
NPHP4O75161 UBE2V2P3-201ENST00000433562 437 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.36□□□□□ -1.87
NPHP4O75161 NPM1P49-201ENST00000448027 714 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.36□□□□□ -1.87
NPHP4O75161 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.36□□□□□ -1.87
NPHP4O75161 HMGB1P47-201ENST00000511281 589 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
NPHP4O75161 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.36□□□□□ -1.87
NPHP4O75161 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NPHP4O75161 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.36□□□□□ -1.87
NPHP4O75161 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.36□□□□□ -1.87
NPHP4O75161 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.36□□□□□ -1.87
NPHP4O75161 AC022387.2-201ENST00000604050 448 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.36□□□□□ -1.87
NPHP4O75161 AP003072.4-201ENST00000624580 310 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 AC119674.1-220ENST00000641502 1048 ntBASIC3.36□□□□□ -1.87
NPHP4O75161 AL445437.1-201ENST00000623157 3087 ntBASIC3.35□□□□□ -1.87
NPHP4O75161 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.35□□□□□ -1.87
NPHP4O75161 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.35□□□□□ -1.87
NPHP4O75161 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPHP4O75161 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NPHP4O75161 Y_RNA.118-201ENST00000363300 101 ntBASIC3.35□□□□□ -1.87
NPHP4O75161 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.35□□□□□ -1.87
NPHP4O75161 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NPHP4O75161 RNA5SP498-201ENST00000411342 120 ntBASIC3.35□□□□□ -1.87
NPHP4O75161 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.35□□□□□ -1.87
NPHP4O75161 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.35□□□□□ -1.87
NPHP4O75161 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.35□□□□□ -1.87
NPHP4O75161 RNU6-295P-201ENST00000516901 104 ntBASIC3.35□□□□□ -1.87
NPHP4O75161 MIR548Y-201ENST00000582739 110 ntBASIC3.35□□□□□ -1.87
NPHP4O75161 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.35□□□□□ -1.87
NPHP4O75161 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.35□□□□□ -1.87
NPHP4O75161 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
NPHP4O75161 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NPHP4O75161 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NPHP4O75161 DYNLT3P1-201ENST00000378574 347 ntBASIC3.34□□□□□ -1.88
NPHP4O75161 RNA5SP213-201ENST00000391031 106 ntBASIC3.34□□□□□ -1.88
NPHP4O75161 RN7SKP123-201ENST00000410732 291 ntBASIC3.34□□□□□ -1.88
NPHP4O75161 MTCO3P11-201ENST00000455103 774 ntBASIC3.34□□□□□ -1.88
NPHP4O75161 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.34□□□□□ -1.88
NPHP4O75161 AC112673.1-201ENST00000513168 575 ntBASIC3.34□□□□□ -1.88
NPHP4O75161 RNU6-1004P-201ENST00000516584 111 ntBASIC3.34□□□□□ -1.88
NPHP4O75161 RNU6-551P-201ENST00000516661 103 ntBASIC3.34□□□□□ -1.88
NPHP4O75161 OR4A45P-201ENST00000529954 901 ntBASIC3.34□□□□□ -1.88
NPHP4O75161 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.34□□□□□ -1.88
NPHP4O75161 MIR4458-201ENST00000578872 75 ntBASIC3.34□□□□□ -1.88
NPHP4O75161 MIR4781-201ENST00000585250 76 ntBASIC3.34□□□□□ -1.88
NPHP4O75161 VN1R84P-201ENST00000593697 235 ntBASIC3.34□□□□□ -1.88
NPHP4O75161 AP004372.1-201ENST00000604842 844 ntBASIC3.34□□□□□ -1.88
NPHP4O75161 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.34□□□□□ -1.88
NPHP4O75161 LINC00216-201ENST00000623548 1126 ntBASIC3.34□□□□□ -1.88
NPHP4O75161 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.34□□□□□ -1.88
NPHP4O75161 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.34□□□□□ -1.88
NPHP4O75161 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPHP4O75161 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPHP4O75161 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPHP4O75161 SNORA51.4-201ENST00000364993 124 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 RNU6-317P-201ENST00000384031 107 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 MIR7-1-201ENST00000384871 110 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 RNA5SP210-201ENST00000391034 120 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.33□□□□□ -1.88
NPHP4O75161 AL606490.7-201ENST00000433136 191 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.33□□□□□ -1.88
NPHP4O75161 AL031663.1-201ENST00000437445 219 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 AC023512.1-201ENST00000444513 499 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 AC007677.1-201ENST00000445757 515 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 MRPL50P4-201ENST00000446432 475 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.33□□□□□ -1.88
NPHP4O75161 AC010683.1-201ENST00000473673 378 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 AC107398.1-201ENST00000486904 505 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 OR52A4P-203ENST00000498233 1014 ntBASIC3.33□□□□□ -1.88
NPHP4O75161 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.33□□□□□ -1.88
NPHP4O75161 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms