Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX1O00570 MCFD2P1-201ENST00000417812 300 ntBASIC5.5□□□□□ -1.53
SOX1O00570 SKA2P1-201ENST00000425592 390 ntBASIC5.5□□□□□ -1.53
SOX1O00570 AL160004.2-201ENST00000432935 350 ntBASIC5.5□□□□□ -1.53
SOX1O00570 AC005019.1-201ENST00000436455 431 ntBASIC5.5□□□□□ -1.53
SOX1O00570 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.5□□□□□ -1.53
SOX1O00570 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.5□□□□□ -1.53
SOX1O00570 AC020550.1-201ENST00000447385 163 ntBASIC5.5□□□□□ -1.53
SOX1O00570 AL162395.1-201ENST00000457882 422 ntBASIC5.5□□□□□ -1.53
SOX1O00570 AL445687.2-201ENST00000458156 728 ntBASIC5.5□□□□□ -1.53
SOX1O00570 RNU7-59P-201ENST00000459101 61 ntBASIC5.5□□□□□ -1.53
SOX1O00570 MTATP8P1-201ENST00000467115 207 ntBASIC5.5□□□□□ -1.53
SOX1O00570 RPL7P43-201ENST00000478876 753 ntBASIC5.5□□□□□ -1.53
SOX1O00570 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX1O00570 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.5□□□□□ -1.53
SOX1O00570 CCDC34P1-201ENST00000507441 517 ntBASIC5.5□□□□□ -1.53
SOX1O00570 AC079140.5-201ENST00000507882 310 ntBASIC5.5□□□□□ -1.53
SOX1O00570 SNORA25.10-201ENST00000515926 124 ntBASIC5.5□□□□□ -1.53
SOX1O00570 PTP4A1P6-201ENST00000531034 478 ntBASIC5.5□□□□□ -1.53
SOX1O00570 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.5□□□□□ -1.53
SOX1O00570 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SOX1O00570 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.5□□□□□ -1.53
SOX1O00570 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.5□□□□□ -1.53
SOX1O00570 AC010653.1-201ENST00000571108 881 ntBASIC5.5□□□□□ -1.53
SOX1O00570 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SOX1O00570 AC104662.1-201ENST00000604448 511 ntBASIC5.5□□□□□ -1.53
SOX1O00570 AC098657.3-201ENST00000620434 263 ntBASIC5.5□□□□□ -1.53
SOX1O00570 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.5□□□□□ -1.53
SOX1O00570 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX1O00570 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SOX1O00570 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SOX1O00570 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SOX1O00570 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SOX1O00570 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SOX1O00570 AL731566.1-201ENST00000620490 1937 ntBASIC5.5□□□□□ -1.53
SOX1O00570 AC239868.2-201ENST00000564237 4527 ntBASIC5.5□□□□□ -1.53
SOX1O00570 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SOX1O00570 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX1O00570 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SOX1O00570 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SOX1O00570 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SOX1O00570 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.5□□□□□ -1.53
SOX1O00570 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SOX1O00570 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.5□□□□□ -1.53
SOX1O00570 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX1O00570 AC068769.1-201ENST00000474767 2426 ntBASIC5.49□□□□□ -1.53
SOX1O00570 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX1O00570 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SOX1O00570 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX1O00570 AC090337.1-201ENST00000579651 2074 ntBASIC5.49□□□□□ -1.53
SOX1O00570 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX1O00570 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SOX1O00570 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX1O00570 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX1O00570 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SOX1O00570 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.49□□□□□ -1.53
SOX1O00570 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SOX1O00570 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX1O00570 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX1O00570 RNA5SP90-201ENST00000364801 99 ntBASIC5.49□□□□□ -1.53
SOX1O00570 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SOX1O00570 RNU6-784P-201ENST00000384330 106 ntBASIC5.49□□□□□ -1.53
SOX1O00570 Y_RNA.476-201ENST00000384347 108 ntBASIC5.49□□□□□ -1.53
SOX1O00570 Y_RNA.557-201ENST00000384680 107 ntBASIC5.49□□□□□ -1.53
SOX1O00570 MIR92A2-201ENST00000385299 75 ntBASIC5.49□□□□□ -1.53
SOX1O00570 EIF4E2P1-201ENST00000393781 255 ntBASIC5.49□□□□□ -1.53
SOX1O00570 DBIP1-201ENST00000401435 260 ntBASIC5.49□□□□□ -1.53
SOX1O00570 RNU4-64P-201ENST00000410795 131 ntBASIC5.49□□□□□ -1.53
SOX1O00570 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX1O00570 BX510359.2-201ENST00000417920 305 ntBASIC5.49□□□□□ -1.53
SOX1O00570 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX1O00570 AL451139.1-201ENST00000434718 346 ntBASIC5.49□□□□□ -1.53
SOX1O00570 RPL36AP6-201ENST00000435770 321 ntBASIC5.49□□□□□ -1.53
SOX1O00570 NOP56P2-201ENST00000447491 769 ntBASIC5.49□□□□□ -1.53
SOX1O00570 AC104058.1-201ENST00000448028 297 ntBASIC5.49□□□□□ -1.53
SOX1O00570 CECR9-201ENST00000453421 199 ntBASIC5.49□□□□□ -1.53
SOX1O00570 SNORD121B-201ENST00000458838 81 ntBASIC5.49□□□□□ -1.53
SOX1O00570 AC004801.2-202ENST00000463559 283 ntBASIC5.49□□□□□ -1.53
SOX1O00570 RN7SL542P-201ENST00000467147 294 ntBASIC5.49□□□□□ -1.53
SOX1O00570 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.49□□□□□ -1.53
SOX1O00570 AL139099.1-201ENST00000497398 403 ntBASIC5.49□□□□□ -1.53
SOX1O00570 AC016559.2-201ENST00000510759 359 ntBASIC5.49□□□□□ -1.53
SOX1O00570 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX1O00570 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SOX1O00570 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.49□□□□□ -1.53
SOX1O00570 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.49□□□□□ -1.53
SOX1O00570 AL049779.3-201ENST00000557141 606 ntBASIC5.49□□□□□ -1.53
SOX1O00570 MIR3138-201ENST00000585238 82 ntBASIC5.49□□□□□ -1.53
SOX1O00570 AC023043.2-201ENST00000589678 1026 ntBASIC5.49□□□□□ -1.53
SOX1O00570 AC008013.2-202ENST00000637965 364 ntBASIC5.49□□□□□ -1.53
SOX1O00570 AL445437.1-201ENST00000623157 3087 ntBASIC5.49□□□□□ -1.53
SOX1O00570 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX1O00570 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.49□□□□□ -1.53
SOX1O00570 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SOX1O00570 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
SOX1O00570 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX1O00570 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX1O00570 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
SOX1O00570 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.48□□□□□ -1.53
SOX1O00570 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms