Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.56□□□□□ -1.84
RTCAO00442 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTCAO00442 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTCAO00442 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTCAO00442 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTCAO00442 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTCAO00442 ZNF876P-202ENST00000398732 1485 ntBASIC3.55□□□□□ -1.84
RTCAO00442 AP004289.2-201ENST00000444413 1457 ntBASIC3.55□□□□□ -1.84
RTCAO00442 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTCAO00442 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTCAO00442 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.55□□□□□ -1.84
RTCAO00442 LINC00561-201ENST00000565815 2738 ntBASIC3.55□□□□□ -1.84
RTCAO00442 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RTCAO00442 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTCAO00442 RNA5SP322-201ENST00000363617 119 ntBASIC3.55□□□□□ -1.84
RTCAO00442 RNU6-83P-201ENST00000384568 112 ntBASIC3.55□□□□□ -1.84
RTCAO00442 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RTCAO00442 RNA5SP424-201ENST00000390988 115 ntBASIC3.55□□□□□ -1.84
RTCAO00442 RN7SKP156-201ENST00000410308 342 ntBASIC3.55□□□□□ -1.84
RTCAO00442 RNA5SP38-201ENST00000410750 119 ntBASIC3.55□□□□□ -1.84
RTCAO00442 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTCAO00442 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.55□□□□□ -1.84
RTCAO00442 AC245052.5-201ENST00000416320 649 ntBASIC3.55□□□□□ -1.84
RTCAO00442 DPPA2P1-201ENST00000428060 556 ntBASIC3.55□□□□□ -1.84
RTCAO00442 PSMA6P3-201ENST00000428242 164 ntBASIC3.55□□□□□ -1.84
RTCAO00442 AL050321.1-201ENST00000432363 400 ntBASIC3.55□□□□□ -1.84
RTCAO00442 NDUFB1P1-201ENST00000435191 180 ntBASIC3.55□□□□□ -1.84
RTCAO00442 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.55□□□□□ -1.84
RTCAO00442 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.55□□□□□ -1.84
RTCAO00442 DNAJC19P1-201ENST00000455312 319 ntBASIC3.55□□□□□ -1.84
RTCAO00442 USP9YP25-201ENST00000457708 443 ntBASIC3.55□□□□□ -1.84
RTCAO00442 RPL30P14-201ENST00000482744 348 ntBASIC3.55□□□□□ -1.84
RTCAO00442 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.55□□□□□ -1.84
RTCAO00442 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.55□□□□□ -1.84
RTCAO00442 COX7A2P2-201ENST00000505291 250 ntBASIC3.55□□□□□ -1.84
RTCAO00442 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.55□□□□□ -1.84
RTCAO00442 AC109445.1-201ENST00000512356 383 ntBASIC3.55□□□□□ -1.84
RTCAO00442 RNA5SP164-201ENST00000516533 110 ntBASIC3.55□□□□□ -1.84
RTCAO00442 AC007991.1-201ENST00000522680 631 ntBASIC3.55□□□□□ -1.84
RTCAO00442 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RTCAO00442 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.55□□□□□ -1.84
RTCAO00442 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.55□□□□□ -1.84
RTCAO00442 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTCAO00442 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.55□□□□□ -1.84
RTCAO00442 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.55□□□□□ -1.84
RTCAO00442 AC022146.1-201ENST00000595307 847 ntBASIC3.55□□□□□ -1.84
RTCAO00442 AC106900.2-201ENST00000604994 317 ntBASIC3.55□□□□□ -1.84
RTCAO00442 AL365503.1-201ENST00000605247 905 ntBASIC3.55□□□□□ -1.84
RTCAO00442 HMGB1P50-201ENST00000605814 607 ntBASIC3.55□□□□□ -1.84
RTCAO00442 AC099778.2-201ENST00000610904 211 ntBASIC3.55□□□□□ -1.84
RTCAO00442 AC140725.3-201ENST00000616193 880 ntBASIC3.55□□□□□ -1.84
RTCAO00442 AC021755.4-201ENST00000616620 456 ntBASIC3.55□□□□□ -1.84
RTCAO00442 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTCAO00442 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.55□□□□□ -1.84
RTCAO00442 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.55□□□□□ -1.84
RTCAO00442 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
RTCAO00442 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.55□□□□□ -1.84
RTCAO00442 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTCAO00442 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTCAO00442 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTCAO00442 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
RTCAO00442 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RTCAO00442 ZNF542P-204ENST00000482727 1305 ntBASIC3.54□□□□□ -1.84
RTCAO00442 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RTCAO00442 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.54□□□□□ -1.84
RTCAO00442 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTCAO00442 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RTCAO00442 RNU6-657P-201ENST00000383904 107 ntBASIC3.54□□□□□ -1.84
RTCAO00442 SNORA57.1-201ENST00000391227 145 ntBASIC3.54□□□□□ -1.84
RTCAO00442 RN7SKP56-201ENST00000410513 331 ntBASIC3.54□□□□□ -1.84
RTCAO00442 AC068533.2-201ENST00000411872 306 ntBASIC3.54□□□□□ -1.84
RTCAO00442 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.54□□□□□ -1.84
RTCAO00442 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
RTCAO00442 BEND7P1-201ENST00000422058 457 ntBASIC3.54□□□□□ -1.84
RTCAO00442 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.54□□□□□ -1.84
RTCAO00442 MTCO2P20-201ENST00000437339 673 ntBASIC3.54□□□□□ -1.84
RTCAO00442 SETD6P1-201ENST00000444575 317 ntBASIC3.54□□□□□ -1.84
RTCAO00442 AL359073.1-201ENST00000448036 403 ntBASIC3.54□□□□□ -1.84
RTCAO00442 HMGB3P8-201ENST00000449709 577 ntBASIC3.54□□□□□ -1.84
RTCAO00442 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.54□□□□□ -1.84
RTCAO00442 RPL7P38-201ENST00000488396 739 ntBASIC3.54□□□□□ -1.84
RTCAO00442 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.54□□□□□ -1.84
RTCAO00442 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.54□□□□□ -1.84
RTCAO00442 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.54□□□□□ -1.84
RTCAO00442 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.54□□□□□ -1.84
RTCAO00442 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.54□□□□□ -1.84
RTCAO00442 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.54□□□□□ -1.84
RTCAO00442 FABP5P12-201ENST00000515543 389 ntBASIC3.54□□□□□ -1.84
RTCAO00442 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.54□□□□□ -1.84
RTCAO00442 FAM60DP-201ENST00000524174 632 ntBASIC3.54□□□□□ -1.84
RTCAO00442 AP001636.2-201ENST00000525517 696 ntBASIC3.54□□□□□ -1.84
RTCAO00442 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.54□□□□□ -1.84
RTCAO00442 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.54□□□□□ -1.84
RTCAO00442 AC006960.3-201ENST00000561845 705 ntBASIC3.54□□□□□ -1.84
RTCAO00442 AC055876.1-202ENST00000567053 138 ntBASIC3.54□□□□□ -1.84
RTCAO00442 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.54□□□□□ -1.84
RTCAO00442 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.54□□□□□ -1.84
RTCAO00442 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.54□□□□□ -1.84
RTCAO00442 DUXAP3-201ENST00000603616 594 ntBASIC3.54□□□□□ -1.84
RTCAO00442 AL022099.1-201ENST00000604551 712 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms