Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.24□□□□□ -1.89
NPIPA2E9PIF3 RPL23AP92-201ENST00000603609 255 ntBASIC3.24□□□□□ -1.89
NPIPA2E9PIF3 DUXAP10-204ENST00000612052 616 ntBASIC3.24□□□□□ -1.89
NPIPA2E9PIF3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.24□□□□□ -1.89
NPIPA2E9PIF3 AC022509.4-201ENST00000621404 572 ntBASIC3.24□□□□□ -1.89
NPIPA2E9PIF3 AL360181.4-201ENST00000621752 134 ntBASIC3.24□□□□□ -1.89
NPIPA2E9PIF3 U6.101-201ENST00000637707 76 ntBASIC3.24□□□□□ -1.89
NPIPA2E9PIF3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NPIPA2E9PIF3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.24□□□□□ -1.89
NPIPA2E9PIF3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
NPIPA2E9PIF3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
NPIPA2E9PIF3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.24□□□□□ -1.89
NPIPA2E9PIF3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 SNRPEP3-201ENST00000338402 276 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 RNU6-216P-201ENST00000363282 104 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 RNU4-68P-201ENST00000364314 141 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 MIR491-201ENST00000384877 84 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 MIR506-201ENST00000384998 124 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 RNU4-65P-201ENST00000410473 140 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AL356320.2-201ENST00000417263 507 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC097713.2-201ENST00000430199 356 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC092427.1-201ENST00000439177 601 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 ZNF886P-201ENST00000450781 723 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC092155.2-201ENST00000454675 477 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC025518.1-201ENST00000479856 347 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AL358832.1-201ENST00000497800 389 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 GTF2IP9-201ENST00000502460 301 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 RNU1-61P-201ENST00000516107 151 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 RNU6-27P-201ENST00000516146 107 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC018630.1-201ENST00000541376 925 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AL049838.1-201ENST00000563647 981 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC005951.1-201ENST00000576706 485 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 BNIP3P40-201ENST00000596017 556 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC245884.10-201ENST00000597355 337 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC006077.1-201ENST00000604746 343 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC010738.1-201ENST00000604970 987 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 U4.6-201ENST00000621618 127 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC120349.2-201ENST00000625002 298 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC091925.2-201ENST00000625059 256 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 OR4G3P-201ENST00000633500 913 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 CR381670.1-201ENST00000624291 1693 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 AC073346.2-201ENST00000624724 2058 ntBASIC3.23□□□□□ -1.89
NPIPA2E9PIF3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AC002546.1-201ENST00000588041 2504 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 SNORD116.1-201ENST00000365628 92 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 RNU6-878P-201ENST00000384578 110 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 RNU6-1242P-201ENST00000391052 103 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 DBIP2-201ENST00000419076 262 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 DUTP6-201ENST00000425573 462 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 HMGN2P20-201ENST00000437531 273 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AL645638.1-201ENST00000440519 361 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 RPL26P28-201ENST00000451325 435 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 RPL32P34-201ENST00000486380 400 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AC134050.1-201ENST00000495088 933 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 SETP14-201ENST00000497538 873 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AC096751.1-202ENST00000502691 1067 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AC026427.2-201ENST00000506228 536 ntBASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.22□□□□□ -1.89
NPIPA2E9PIF3 AC026412.2-201ENST00000512270 1075 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms