Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 DDX10P1-201ENST00000448545 1933 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 SNORD56.2-201ENST00000363242 71 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 Y_RNA.126-201ENST00000363382 111 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 U3.11-201ENST00000364476 212 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 Y_RNA.248-201ENST00000364501 109 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 RNA5SP187-201ENST00000384400 119 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 RNU6-882P-201ENST00000391025 103 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 RNU6-780P-201ENST00000391030 104 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 RNU4-25P-201ENST00000410569 230 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 RNA5SP107-201ENST00000411358 122 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 RPL23AP38-201ENST00000423801 469 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 MTCO2P19-201ENST00000427513 598 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 RPL23AP30-201ENST00000432419 501 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 GPR143P-201ENST00000434155 205 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AL596276.1-201ENST00000434465 418 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AC004866.2-201ENST00000438285 481 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AL662791.1-201ENST00000441992 928 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 NDUFS5P3-201ENST00000450668 321 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AC003071.1-201ENST00000451219 789 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 NUTF2P7-201ENST00000453086 375 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AL121769.1-201ENST00000469473 401 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 RN7SL41P-201ENST00000476144 297 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AC019235.1-201ENST00000503847 207 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AC093840.1-201ENST00000511599 336 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 RNA5SP249-201ENST00000516127 99 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 RN7SKP21-201ENST00000516503 220 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 SNORA31.20-201ENST00000517111 133 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AL139286.1-201ENST00000604465 483 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AL022099.1-201ENST00000604551 712 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AC243312.2-201ENST00000623340 601 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 AC006971.1-201ENST00000407916 4486 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 LINC00622-201ENST00000562811 1570 ntBASIC4.09□□□□□ -1.75
MBD3L4A6NDZ8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.09□□□□□ -1.76
MBD3L4A6NDZ8 AC025031.4-201ENST00000621248 3271 ntBASIC4.09□□□□□ -1.76
MBD3L4A6NDZ8 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
MBD3L4A6NDZ8 AC100778.3-201ENST00000580060 1750 ntBASIC4.09□□□□□ -1.76
MBD3L4A6NDZ8 NXPH1-205ENST00000602349 1953 ntBASIC4.09□□□□□ -1.76
MBD3L4A6NDZ8 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
MBD3L4A6NDZ8 AL365440.1-201ENST00000436135 2167 ntBASIC4.09□□□□□ -1.76
MBD3L4A6NDZ8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 RNU6-223P-201ENST00000362830 107 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 RNU6-1085P-201ENST00000363576 107 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 RN7SKP27-201ENST00000410684 333 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 RPL21P24-201ENST00000413752 448 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 AL356387.2-201ENST00000422272 243 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 CKS1BP6-201ENST00000424932 240 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 ELOCP14-201ENST00000428070 331 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 AC079780.1-201ENST00000428259 207 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 ELOCP7-201ENST00000439968 331 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 AC005094.1-201ENST00000440420 368 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 AL512326.1-201ENST00000443050 721 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 AC104651.2-201ENST00000447549 528 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 RPS11P1-201ENST00000451072 473 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 AC005008.1-201ENST00000456151 612 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 Vault.1-201ENST00000516474 102 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 RNU6-410P-201ENST00000517006 107 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 MTCYBP41-201ENST00000528913 1123 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 AC068831.4-201ENST00000556118 109 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 AC087477.6-201ENST00000559595 843 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 RPL21P12-201ENST00000559810 515 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 BNIP3P5-201ENST00000562290 498 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 HMGB1P33-201ENST00000563485 527 ntBASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.08□□□□□ -1.76
MBD3L4A6NDZ8 MIR1254-2-201ENST00000579553 63 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms