Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 DUXAP3-201ENST00000603616 594 ntBASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 HSPE1P14-201ENST00000605812 302 ntBASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AL392048.1-201ENST00000613946 534 ntBASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC006249.1-201ENST00000621223 471 ntBASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC010297.1-201ENST00000623948 149 ntBASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AL355596.1-201ENST00000565399 3996 ntBASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.82□□□□□ -2.12
TRBV6-8A0A0A6YYG3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 RNU6-543P-201ENST00000362576 108 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 RNA5SP393-201ENST00000363423 117 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 CD24P4-201ENST00000382840 243 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 RPS3AP26-201ENST00000398259 784 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AL592148.1-201ENST00000413568 445 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 RPLP0P7-201ENST00000416050 667 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC073310.1-201ENST00000423226 1033 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC006548.1-201ENST00000427470 102 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 MTATP6P4-201ENST00000427725 675 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 RPS26P56-201ENST00000444468 240 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC068135.1-201ENST00000446164 246 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AL445669.2-201ENST00000454425 421 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 GAPDHP39-201ENST00000481866 979 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 MTCO3P44-201ENST00000510977 541 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 TBCAP3-201ENST00000512475 312 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 SNORA70.24-201ENST00000517233 118 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 HMGB1P46-201ENST00000520062 610 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC019227.1-201ENST00000526902 510 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC123904.3-201ENST00000547218 814 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 XIAPP1-201ENST00000603162 600 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC022387.2-201ENST00000604050 448 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC135178.6-201ENST00000605314 398 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC018926.3-201ENST00000618841 406 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 CR381572.1-201ENST00000625098 102 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AL356118.1-201ENST00000635272 1078 ntBASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC1.81□□□□□ -2.12
TRBV6-8A0A0A6YYG3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 Y_RNA.493-201ENST00000384422 102 ntBASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AL356057.2-201ENST00000403318 432 ntBASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 RNU4-78P-201ENST00000410940 126 ntBASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 RPS3AP9-201ENST00000417027 792 ntBASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 USP9YP20-201ENST00000419224 558 ntBASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC105272.1-201ENST00000438604 198 ntBASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 RPS12P2-201ENST00000439728 269 ntBASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC004865.1-201ENST00000442276 1003 ntBASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 RPS3AP12-201ENST00000443616 753 ntBASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.8□□□□□ -2.12
TRBV6-8A0A0A6YYG3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms