Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AL359893.1-201ENST00000447628 1580 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AP002001.2-201ENST00000529025 1469 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 Y_RNA.70-201ENST00000362886 110 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 RNU4-76P-201ENST00000364509 141 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AIMP1P1-201ENST00000418670 937 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 RPS12P5-201ENST00000423449 371 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 OR8F1P-201ENST00000425243 930 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AC007742.1-201ENST00000425789 329 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 ELOCP26-201ENST00000436067 329 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 MTND4LP16-201ENST00000440828 295 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AC114495.1-201ENST00000441274 436 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 RPL23AP33-201ENST00000442301 452 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 MTCO1P42-201ENST00000457379 726 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AL445433.1-201ENST00000457507 257 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 RPL7P24-201ENST00000493052 752 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 BNIP3P41-201ENST00000503774 571 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AC117522.1-201ENST00000509821 380 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 TMEM248P1-201ENST00000510579 951 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 PTGES3P3-201ENST00000511479 482 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AC093677.1-201ENST00000514414 678 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 RN7SKP244-201ENST00000516513 307 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AP001646.1-201ENST00000527936 915 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AC006130.2-201ENST00000586202 326 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 C8orf59P2-201ENST00000603441 271 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AC005034.5-201ENST00000604219 466 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 RNA5SP108-201ENST00000605921 117 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AC092954.2-201ENST00000609103 430 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AC131902.3-201ENST00000611767 581 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 MIR6891-201ENST00000618788 93 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 AL049780.3-201ENST00000624612 1583 ntBASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC187A0A096LP49 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 CCT4P2-201ENST00000233836 1548 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 RNU6-297P-201ENST00000384636 107 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 MIR23A-201ENST00000385245 73 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 RN7SKP202-201ENST00000410439 330 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 Y_RNA.608-201ENST00000410647 95 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 RNU6-248P-201ENST00000410720 107 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 MTND1P14-201ENST00000427400 950 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 BTF3P10-201ENST00000433415 495 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 CKS1BP5-201ENST00000434172 273 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 AC091862.1-201ENST00000438016 1100 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 AL022238.1-201ENST00000442557 355 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 AL590399.6-201ENST00000446396 307 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 Z82190.1-201ENST00000454534 490 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 AP001992.1-205ENST00000462248 379 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 RPL31P58-201ENST00000469001 379 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 AP002812.1-201ENST00000495378 474 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 RPS27AP13-201ENST00000498403 237 ntBASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC187A0A096LP49 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms