Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 MIR1282-201ENST00000408865 101 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 RN7SKP114-201ENST00000410327 279 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 AL031736.2-201ENST00000426573 787 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 RPL21P40-201ENST00000428586 483 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 UQCRBP2-201ENST00000447827 297 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 AC118758.1-202ENST00000454719 225 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 RNU6-1218P-201ENST00000458990 108 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 RPS26P21-201ENST00000475397 348 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 RPS4XP22-201ENST00000480755 780 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 AC005017.1-201ENST00000482002 490 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 AL160314.1-201ENST00000490836 438 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 HMGN1P11-201ENST00000508668 303 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 IGKV2D-38-201ENST00000518423 240 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 FXNP1-201ENST00000555153 337 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 AL034351.1-201ENST00000605288 668 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 Y_RNA.802-201ENST00000614892 130 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 AL591926.1-201ENST00000620542 217 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 AC015799.1-201ENST00000622996 3122 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 MSL3P1-202ENST00000440028 1468 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 MIR410-201ENST00000362222 80 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 RNU6-818P-201ENST00000364837 108 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 AC099677.1-201ENST00000420575 175 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 AC024067.1-201ENST00000426199 223 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 MTND4LP9-201ENST00000427694 174 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 USP9YP7-201ENST00000436723 430 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 AL596266.1-201ENST00000448132 400 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 USP9YP32-201ENST00000452432 430 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 RN7SL165P-201ENST00000477476 291 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 RNU6-914P-201ENST00000516749 109 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 AC073581.1-201ENST00000519036 575 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 CR383656.7-201ENST00000548164 174 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 RPL23AP87-202ENST00000573039 466 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 MIR4732-201ENST00000581873 76 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 AC068213.1-201ENST00000625124 226 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 AC005725.1-201ENST00000577346 2607 ntBASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDHGA4Q9Y5G9 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 Y_RNA.23-201ENST00000362496 106 ntBASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 RNA5SP232-201ENST00000364144 119 ntBASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 AL357075.1-201ENST00000404107 726 ntBASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 RN7SKP271-201ENST00000410528 320 ntBASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 AL096701.2-201ENST00000416920 238 ntBASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 AC245884.2-201ENST00000426257 404 ntBASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 AL590399.2-201ENST00000427536 309 ntBASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 MTATP6P4-201ENST00000427725 675 ntBASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 AC128677.1-201ENST00000436016 442 ntBASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDHGA4Q9Y5G9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms