Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SNORD67-201ENST00000390833 111 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 RNU2-72P-201ENST00000411175 163 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 Z92545.1-201ENST00000411782 234 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 RPL32P35-201ENST00000415214 394 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 FCF1P2-201ENST00000415284 583 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 RPL31P54-201ENST00000429803 370 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 AC011242.1-201ENST00000433596 1158 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 RSL24D1P3-201ENST00000449255 495 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 PABPC1P3-201ENST00000469174 459 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 VPS26AP1-201ENST00000483197 979 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 AC091860.1-201ENST00000505723 432 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 AC004062.1-201ENST00000509926 645 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 SNORA64.4-201ENST00000516632 81 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 RNA5SP468-201ENST00000516782 93 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 AL136520.1-202ENST00000555494 763 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 AC087481.2-201ENST00000565492 330 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 VN1R74P-201ENST00000613259 503 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AC111188.2-201ENST00000529697 1387 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 MIR22-201ENST00000362190 85 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 RNU6-50P-201ENST00000362356 103 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 RNA5SP383-201ENST00000362934 120 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 RNU6-582P-201ENST00000362989 107 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 RNA5SP293-201ENST00000410527 113 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 RNU6-575P-201ENST00000411326 105 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AC006960.1-201ENST00000419980 153 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AC005345.1-201ENST00000431868 217 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 RPS12P18-201ENST00000442381 270 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 snoU13.4-201ENST00000458916 104 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 RPL21P18-201ENST00000469899 480 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 RNU6-885P-201ENST00000516607 104 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 OR4H12P-201ENST00000556269 907 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AC005951.1-201ENST00000576706 485 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AL160281.1-201ENST00000605307 311 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AC006329.2-201ENST00000611491 394 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AC092650.2-201ENST00000619984 902 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 AC009318.4-201ENST00000620496 486 ntBASIC3.26□□□□□ -1.89
CDH9Q9ULB4 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDH9Q9ULB4 MTND5P24-201ENST00000438892 1767 ntBASIC3.25□□□□□ -1.89
CDH9Q9ULB4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 AC244517.1-201ENST00000606030 2086 ntBASIC3.25□□□□□ -1.89
CDH9Q9ULB4 DBF4P1-201ENST00000412976 1892 ntBASIC3.25□□□□□ -1.89
CDH9Q9ULB4 RNU6-251P-201ENST00000363235 104 ntBASIC3.25□□□□□ -1.89
CDH9Q9ULB4 RNU6-525P-201ENST00000363685 104 ntBASIC3.25□□□□□ -1.89
CDH9Q9ULB4 U3.11-201ENST00000364476 212 ntBASIC3.25□□□□□ -1.89
CDH9Q9ULB4 RNU1-140P-201ENST00000365040 165 ntBASIC3.25□□□□□ -1.89
CDH9Q9ULB4 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 AC096664.2-201ENST00000411843 406 ntBASIC3.25□□□□□ -1.89
CDH9Q9ULB4 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 SSXP4-201ENST00000451349 245 ntBASIC3.25□□□□□ -1.89
CDH9Q9ULB4 ARPC3P2-201ENST00000457786 533 ntBASIC3.25□□□□□ -1.89
CDH9Q9ULB4 AC068724.1-201ENST00000487100 792 ntBASIC3.25□□□□□ -1.89
CDH9Q9ULB4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 RN7SKP272-201ENST00000516988 232 ntBASIC3.25□□□□□ -1.89
CDH9Q9ULB4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 H3F3AP1-201ENST00000559984 334 ntBASIC3.25□□□□□ -1.89
CDH9Q9ULB4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH9Q9ULB4 AC093519.1-201ENST00000566109 298 ntBASIC3.25□□□□□ -1.89
CDH9Q9ULB4 RPAP2P1-201ENST00000603626 1168 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms