Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC068339.2-201ENST00000534395 618 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 AC023043.3-201ENST00000593113 385 ntBASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
PHRF1Q9P1Y6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 AC093909.5-201ENST00000621839 1799 ntBASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 Y_RNA.40-201ENST00000362645 93 ntBASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 SNORA67.3-201ENST00000384366 140 ntBASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 SNORA48.3-201ENST00000391081 134 ntBASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 NPM1P10-201ENST00000398310 865 ntBASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 SNORA11.4-201ENST00000408823 129 ntBASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 YWHAZP7-201ENST00000436906 631 ntBASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 AC091917.2-201ENST00000505002 744 ntBASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 AC011494.1-201ENST00000596454 237 ntBASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 AL022099.1-201ENST00000604551 712 ntBASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 AC245517.5-201ENST00000611529 162 ntBASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.92□□□□□ -1.94
PHRF1Q9P1Y6 MIR6073-201ENST00000352083 89 ntBASIC2.91□□□□□ -1.94
PHRF1Q9P1Y6 OR5H15-201ENST00000383696 930 ntBASIC2.91□□□□□ -1.94
PHRF1Q9P1Y6 CFTRP1-201ENST00000456646 183 ntBASIC2.91□□□□□ -1.94
PHRF1Q9P1Y6 AC091179.1-201ENST00000461606 579 ntBASIC2.91□□□□□ -1.94
PHRF1Q9P1Y6 AC108729.3-201ENST00000513484 108 ntBASIC2.91□□□□□ -1.94
PHRF1Q9P1Y6 TRAV11-201ENST00000539512 339 ntBASIC2.91□□□□□ -1.94
PHRF1Q9P1Y6 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.91□□□□□ -1.94
PHRF1Q9P1Y6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.91□□□□□ -1.94
PHRF1Q9P1Y6 AC010198.2-201ENST00000550612 259 ntBASIC2.91□□□□□ -1.94
PHRF1Q9P1Y6 OR4K7P-201ENST00000580232 945 ntBASIC2.91□□□□□ -1.94
PHRF1Q9P1Y6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.91□□□□□ -1.94
PHRF1Q9P1Y6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PHRF1Q9P1Y6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PHRF1Q9P1Y6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.91□□□□□ -1.94
PHRF1Q9P1Y6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.91□□□□□ -1.94
PHRF1Q9P1Y6 SNORA26.9-201ENST00000391322 122 ntBASIC2.9□□□□□ -1.94
PHRF1Q9P1Y6 AL096701.2-201ENST00000416920 238 ntBASIC2.9□□□□□ -1.94
PHRF1Q9P1Y6 RPL7P53-201ENST00000421245 739 ntBASIC2.9□□□□□ -1.94
PHRF1Q9P1Y6 AC108667.1-201ENST00000428618 249 ntBASIC2.9□□□□□ -1.94
PHRF1Q9P1Y6 AL138787.1-202ENST00000437804 898 ntBASIC2.9□□□□□ -1.94
PHRF1Q9P1Y6 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC2.9□□□□□ -1.94
PHRF1Q9P1Y6 AL035551.1-201ENST00000446931 348 ntBASIC2.9□□□□□ -1.94
PHRF1Q9P1Y6 RNU6-1053P-201ENST00000515930 101 ntBASIC2.9□□□□□ -1.94
PHRF1Q9P1Y6 AC090819.1-201ENST00000523800 1111 ntBASIC2.9□□□□□ -1.94
PHRF1Q9P1Y6 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.9□□□□□ -1.94
PHRF1Q9P1Y6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PHRF1Q9P1Y6 XIAPP3-201ENST00000312918 795 ntBASIC2.9□□□□□ -1.95
PHRF1Q9P1Y6 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
PHRF1Q9P1Y6 AL138785.1-201ENST00000425821 331 ntBASIC2.9□□□□□ -1.95
PHRF1Q9P1Y6 Z82205.1-201ENST00000428456 297 ntBASIC2.9□□□□□ -1.95
PHRF1Q9P1Y6 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.9□□□□□ -1.95
PHRF1Q9P1Y6 AC008571.1-201ENST00000467232 300 ntBASIC2.9□□□□□ -1.95
PHRF1Q9P1Y6 LDHBP3-201ENST00000514909 822 ntBASIC2.9□□□□□ -1.95
PHRF1Q9P1Y6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.9□□□□□ -1.95
PHRF1Q9P1Y6 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.9□□□□□ -1.95
PHRF1Q9P1Y6 AL160237.3-201ENST00000604114 1013 ntBASIC2.9□□□□□ -1.95
PHRF1Q9P1Y6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.9□□□□□ -1.95
PHRF1Q9P1Y6 Y_RNA.796-201ENST00000364268 102 ntBASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 Y_RNA.799-201ENST00000364992 102 ntBASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 RNA5SP239-201ENST00000410218 129 ntBASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 SPA17P1-201ENST00000416656 452 ntBASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 ATG10-AS1-201ENST00000504846 648 ntBASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 OR4U1P-201ENST00000554958 912 ntBASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 AC017076.1-201ENST00000607613 578 ntBASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 MIR8070-201ENST00000616510 88 ntBASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 CYP3A51P-201ENST00000633513 256 ntBASIC2.89□□□□□ -1.95
PHRF1Q9P1Y6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 RNU1-138P-201ENST00000384093 164 ntBASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 RNU6-321P-201ENST00000410912 106 ntBASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 AC004866.2-201ENST00000438285 481 ntBASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 AP000705.1-201ENST00000454567 350 ntBASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 RNU6-826P-201ENST00000516827 104 ntBASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 NF1P5-201ENST00000588287 448 ntBASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 AL451074.6-201ENST00000608512 729 ntBASIC2.88□□□□□ -1.95
PHRF1Q9P1Y6 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms