Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.83□□□□□ -1.64
TLR9Q9NR96 PARP4P3-201ENST00000510265 317 ntBASIC4.83□□□□□ -1.64
TLR9Q9NR96 RNA5SP315-201ENST00000516340 116 ntBASIC4.83□□□□□ -1.64
TLR9Q9NR96 RNA5SP312-201ENST00000517068 116 ntBASIC4.83□□□□□ -1.64
TLR9Q9NR96 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.83□□□□□ -1.64
TLR9Q9NR96 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.83□□□□□ -1.64
TLR9Q9NR96 AP003122.4-201ENST00000530980 758 ntBASIC4.83□□□□□ -1.64
TLR9Q9NR96 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TLR9Q9NR96 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.83□□□□□ -1.64
TLR9Q9NR96 MIR4298-201ENST00000584380 73 ntBASIC4.83□□□□□ -1.64
TLR9Q9NR96 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.83□□□□□ -1.64
TLR9Q9NR96 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.83□□□□□ -1.64
TLR9Q9NR96 AL591034.3-201ENST00000605511 685 ntBASIC4.83□□□□□ -1.64
TLR9Q9NR96 AC091953.5-201ENST00000622919 233 ntBASIC4.83□□□□□ -1.64
TLR9Q9NR96 AC019278.1-201ENST00000623516 479 ntBASIC4.83□□□□□ -1.64
TLR9Q9NR96 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TLR9Q9NR96 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TLR9Q9NR96 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TLR9Q9NR96 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TLR9Q9NR96 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TLR9Q9NR96 SPRR2C-201ENST00000290702 219 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 OR5P1P-201ENST00000299512 925 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TLR9Q9NR96 RNU6-1085P-201ENST00000363576 107 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 RNU6-343P-201ENST00000364709 104 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 RNY4P34-201ENST00000364779 95 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 AL022722.2-201ENST00000402519 180 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 U3.35-201ENST00000408405 208 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TLR9Q9NR96 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 ZNF90P2-204ENST00000419323 1075 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 SDCBPP3-201ENST00000419629 891 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 PDSS1P1-201ENST00000422953 1114 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 SDCBPP1-201ENST00000440192 890 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 HSFY6P-201ENST00000445573 403 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 AL589765.3-201ENST00000446084 462 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 AC002381.1-201ENST00000447049 280 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 RPL7L1P8-201ENST00000469911 741 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 AC087879.1-201ENST00000474343 374 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 RPL30P11-201ENST00000495304 339 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 MTND5P5-201ENST00000503764 376 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 AC117522.3-201ENST00000507974 584 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 RPS3AP23-202ENST00000574601 686 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 NRBF2P1-201ENST00000587407 859 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 NF1P5-201ENST00000588287 448 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 AL391646.1-201ENST00000603860 190 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 AC055876.5-201ENST00000605667 259 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 COX6CP4-201ENST00000605798 228 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 AP001005.3-201ENST00000622049 129 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 MIR492-201ENST00000638676 116 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TLR9Q9NR96 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TLR9Q9NR96 AL391684.1-202ENST00000641293 1636 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.82□□□□□ -1.64
TLR9Q9NR96 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TLR9Q9NR96 CCT4P2-201ENST00000233836 1548 ntBASIC4.82□□□□□ -1.64
TLR9Q9NR96 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
TLR9Q9NR96 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TLR9Q9NR96 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TLR9Q9NR96 AC126323.6-202ENST00000568092 3511 ntBASIC4.81□□□□□ -1.64
TLR9Q9NR96 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.81□□□□□ -1.64
TLR9Q9NR96 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TLR9Q9NR96 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TLR9Q9NR96 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TLR9Q9NR96 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TLR9Q9NR96 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TLR9Q9NR96 RNA5SP391-201ENST00000363456 119 ntBASIC4.81□□□□□ -1.64
TLR9Q9NR96 RNU1-130P-201ENST00000363930 160 ntBASIC4.81□□□□□ -1.64
TLR9Q9NR96 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.81□□□□□ -1.64
TLR9Q9NR96 RNU6-692P-201ENST00000384496 107 ntBASIC4.81□□□□□ -1.64
TLR9Q9NR96 AL031679.1-201ENST00000400616 525 ntBASIC4.81□□□□□ -1.64
TLR9Q9NR96 AL024474.1-201ENST00000404655 591 ntBASIC4.81□□□□□ -1.64
TLR9Q9NR96 JKAMPP1-201ENST00000413804 919 ntBASIC4.81□□□□□ -1.64
TLR9Q9NR96 SPA17P1-201ENST00000416656 452 ntBASIC4.81□□□□□ -1.64
TLR9Q9NR96 E2F6P2-201ENST00000420708 748 ntBASIC4.81□□□□□ -1.64
TLR9Q9NR96 PIGFP2-201ENST00000421400 651 ntBASIC4.81□□□□□ -1.64
TLR9Q9NR96 RPL23AP38-201ENST00000423801 469 ntBASIC4.81□□□□□ -1.64
TLR9Q9NR96 NANOGP6-201ENST00000429190 847 ntBASIC4.81□□□□□ -1.64
TLR9Q9NR96 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.81□□□□□ -1.64
TLR9Q9NR96 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.81□□□□□ -1.64
TLR9Q9NR96 AC002486.1-201ENST00000435098 391 ntBASIC4.81□□□□□ -1.64
TLR9Q9NR96 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.81□□□□□ -1.64
TLR9Q9NR96 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.81□□□□□ -1.64
TLR9Q9NR96 RAD23BP3-201ENST00000454157 1152 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms