Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 FCF1P8-201ENST00000510322 597 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 OR5AP1P-201ENST00000529730 940 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AP003385.6-201ENST00000531603 374 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 MIR4276-201ENST00000584832 70 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AC096947.1-201ENST00000603233 470 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AC009237.15-201ENST00000610252 501 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AL590282.1-201ENST00000610379 1136 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AC058791.1-201ENST00000608412 3198 ntBASIC3.52□□□□□ -1.85
HPS4Q9NQG7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HPS4Q9NQG7 AC007256.1-201ENST00000392253 2765 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AC007496.3-201ENST00000624987 3443 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 ZNF542P-204ENST00000482727 1305 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AC093908.1-201ENST00000623125 8092 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 SNORA51.6-201ENST00000384151 125 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 SNORD65.1-201ENST00000390889 71 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 SNORA48.5-201ENST00000391143 135 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 RPL31P12-201ENST00000422587 358 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AC006989.1-201ENST00000427212 131 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 NEK4P1-201ENST00000433383 879 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AC127537.2-201ENST00000439258 465 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 MTCO1P48-201ENST00000448024 1096 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 ARPC3P2-201ENST00000457786 533 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 SNORA59A-201ENST00000459326 152 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 PABPC1P3-201ENST00000469174 459 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AL024509.2-201ENST00000493462 493 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 RNU1-61P-201ENST00000516107 151 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AC093331.1-201ENST00000521474 169 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AC109635.4-202ENST00000531666 412 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AC090502.2-201ENST00000549267 280 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 TGIF1P1-201ENST00000558095 802 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 CKS1BP3-201ENST00000600888 237 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AC024933.1-201ENST00000608472 348 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AC073968.1-201ENST00000618594 637 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 AC084824.4-201ENST00000620106 731 ntBASIC3.51□□□□□ -1.85
HPS4Q9NQG7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HPS4Q9NQG7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HPS4Q9NQG7 Z83843.1-201ENST00000604070 3685 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HPS4Q9NQG7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HPS4Q9NQG7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.5□□□□□ -1.85
HPS4Q9NQG7 Z99496.1-201ENST00000469424 1477 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
HPS4Q9NQG7 RNU6-989P-201ENST00000362756 107 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 Y_RNA.111-201ENST00000363248 100 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 RNA5SP197-201ENST00000363357 119 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 RNU6-629P-201ENST00000384061 103 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 SNORA48.8-201ENST00000391324 134 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 RSL24D1P1-201ENST00000404972 493 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 AL583834.1-201ENST00000406943 343 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 TOMM22P1-201ENST00000418578 312 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.5□□□□□ -1.85
HPS4Q9NQG7 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.5□□□□□ -1.85
HPS4Q9NQG7 RPL7P44-201ENST00000424827 742 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.5□□□□□ -1.85
HPS4Q9NQG7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.5□□□□□ -1.85
HPS4Q9NQG7 SSXP4-201ENST00000451349 245 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 RPL12P26-201ENST00000452430 487 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.5□□□□□ -1.85
HPS4Q9NQG7 RPS24P6-201ENST00000452670 400 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 AC010468.1-201ENST00000461022 817 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 AC013828.1-201ENST00000481845 158 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 RPL23AP44-201ENST00000482216 473 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 RPS3AP50-201ENST00000487064 803 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 RPL7P23-201ENST00000493874 747 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 AC108078.3-201ENST00000502633 489 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 AC021678.1-201ENST00000505195 936 ntBASIC3.5□□□□□ -1.85
HPS4Q9NQG7 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.5□□□□□ -1.85
HPS4Q9NQG7 RNA5SP468-201ENST00000516782 93 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms