Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 ZNF519P2-201ENST00000557032 169 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AL031176.1-201ENST00000604554 466 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AL161734.1-201ENST00000609720 557 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 U4.5-201ENST00000617137 123 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC006065.5-201ENST00000623427 349 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 MTND5P3-201ENST00000438536 1800 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AC067945.1-201ENST00000342609 618 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 RPS16P5-201ENST00000406501 404 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 RNU6-195P-201ENST00000411352 109 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AL160275.2-201ENST00000412010 394 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 RPS20P14-201ENST00000412545 360 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 USP9YP36-201ENST00000424581 829 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AC233728.2-201ENST00000425348 757 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AC073264.2-201ENST00000448886 166 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 snoU13.3-201ENST00000459441 104 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AC010493.1-201ENST00000513479 292 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 RNA5SP154-201ENST00000516193 111 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 RNU4-60P-201ENST00000517239 135 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 MTND4LP26-201ENST00000518144 282 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AC087481.2-201ENST00000565492 330 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 RNA5SP108-201ENST00000605921 117 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AC126118.1-201ENST00000607744 628 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AL355472.4-201ENST00000610233 626 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 Mico1.1-201ENST00000611698 204 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AC136475.10-201ENST00000620253 385 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AC068880.5-201ENST00000624331 290 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 OR5H6-203ENST00000642105 978 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 DHX40P1-201ENST00000588725 1412 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 AC024560.2-201ENST00000507981 1497 ntBASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM54Q9BYV2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 RNA5SP52-201ENST00000362448 134 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 RPL23AP32-201ENST00000395315 459 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 GSTA9P-201ENST00000406231 611 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 RNU2-47P-201ENST00000410649 186 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 SNORA74C-2-201ENST00000411179 201 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AC127391.1-201ENST00000411737 98 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 PIGFP2-201ENST00000421400 651 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 EIF1P1-201ENST00000421436 341 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 MTCYBP5-201ENST00000423752 1135 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AC119618.1-201ENST00000434191 222 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 RPL35AP28-201ENST00000459730 331 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 RN7SL354P-201ENST00000469282 294 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 RBM43P1-201ENST00000476891 1081 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AC055855.1-201ENST00000489563 579 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AC025445.1-201ENST00000502728 300 ntBASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM54Q9BYV2 CR383656.7-201ENST00000548164 174 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms