Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 GTF2IP22-201ENST00000554443 182 ntBASIC3.84□□□□□ -1.79
NR1H4Q96RI1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.84□□□□□ -1.79
NR1H4Q96RI1 AC044860.2-201ENST00000561005 179 ntBASIC3.84□□□□□ -1.79
NR1H4Q96RI1 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.84□□□□□ -1.79
NR1H4Q96RI1 AC011260.1-201ENST00000578420 472 ntBASIC3.84□□□□□ -1.79
NR1H4Q96RI1 OR4K8P-201ENST00000578842 1048 ntBASIC3.84□□□□□ -1.79
NR1H4Q96RI1 MIR3934-201ENST00000579806 107 ntBASIC3.84□□□□□ -1.79
NR1H4Q96RI1 MIR4307-201ENST00000582802 84 ntBASIC3.84□□□□□ -1.79
NR1H4Q96RI1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.84□□□□□ -1.79
NR1H4Q96RI1 AC022916.3-201ENST00000592961 742 ntBASIC3.84□□□□□ -1.79
NR1H4Q96RI1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.84□□□□□ -1.79
NR1H4Q96RI1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.84□□□□□ -1.79
NR1H4Q96RI1 AL590240.3-201ENST00000621416 943 ntBASIC3.84□□□□□ -1.79
NR1H4Q96RI1 AL360181.4-201ENST00000621752 134 ntBASIC3.84□□□□□ -1.79
NR1H4Q96RI1 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.84□□□□□ -1.79
NR1H4Q96RI1 AC093591.3-201ENST00000634516 308 ntBASIC3.84□□□□□ -1.79
NR1H4Q96RI1 U6.98-201ENST00000637157 84 ntBASIC3.84□□□□□ -1.79
NR1H4Q96RI1 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.84□□□□□ -1.79
NR1H4Q96RI1 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.84□□□□□ -1.79
NR1H4Q96RI1 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NR1H4Q96RI1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NR1H4Q96RI1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.84□□□□□ -1.79
NR1H4Q96RI1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NR1H4Q96RI1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NR1H4Q96RI1 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
NR1H4Q96RI1 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
NR1H4Q96RI1 AC131971.1-201ENST00000332881 1482 ntBASIC3.84□□□□□ -1.8
NR1H4Q96RI1 AC012321.1-201ENST00000561622 1588 ntBASIC3.84□□□□□ -1.8
NR1H4Q96RI1 AL645937.1-201ENST00000641739 1652 ntBASIC3.84□□□□□ -1.8
NR1H4Q96RI1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.84□□□□□ -1.8
NR1H4Q96RI1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
NR1H4Q96RI1 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.84□□□□□ -1.8
NR1H4Q96RI1 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 HSPE1P8-201ENST00000406997 288 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 CRYBB2P1-203ENST00000415709 538 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 BX510359.2-201ENST00000417920 305 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 ISCA1P2-201ENST00000438679 421 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 RPS29P31-201ENST00000446147 164 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 RN7SL177P-201ENST00000476596 299 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC116337.2-201ENST00000477662 156 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 TMED11P-201ENST00000479478 690 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC092451.1-201ENST00000480211 153 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC109486.1-201ENST00000486833 374 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 RN7SL271P-201ENST00000487601 295 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC013356.1-201ENST00000489027 564 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 RPL7P23-201ENST00000493874 747 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 HMGN1P28-201ENST00000521340 364 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 MTND4LP18-201ENST00000526864 291 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 ROCK1P1-201ENST00000573767 549 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 MIR4425-201ENST00000580572 84 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC007687.1-201ENST00000602704 304 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AP000403.1-201ENST00000603349 851 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC079587.1-201ENST00000603846 277 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AL158211.4-201ENST00000606988 584 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC133644.2-201ENST00000608142 540 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC068870.2-201ENST00000620635 389 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AL161637.1-201ENST00000622380 412 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC073530.2-201ENST00000623987 261 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 ZNF833P-201ENST00000424938 1494 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NR1H4Q96RI1 MFSD8-236ENST00000641509 4050 ntBASIC3.83□□□□□ -1.8
NR1H4Q96RI1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 SDAD1P1-202ENST00000524156 2051 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AC011460.1-201ENST00000636268 1834 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 ELL2P3-201ENST00000457883 1602 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NR1H4Q96RI1 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 AC024560.2-201ENST00000507981 1497 ntBASIC3.82□□□□□ -1.8
NR1H4Q96RI1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms