Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6□□□□□ -1.45
CALR3Q96L12 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6□□□□□ -1.45
CALR3Q96L12 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CALR3Q96L12 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
CALR3Q96L12 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CALR3Q96L12 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CALR3Q96L12 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CALR3Q96L12 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CALR3Q96L12 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6□□□□□ -1.45
CALR3Q96L12 HSPA8P4-201ENST00000511877 1920 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.99□□□□□ -1.45
CALR3Q96L12 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.99□□□□□ -1.45
CALR3Q96L12 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CALR3Q96L12 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.99□□□□□ -1.45
CALR3Q96L12 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.99□□□□□ -1.45
CALR3Q96L12 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CALR3Q96L12 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CALR3Q96L12 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CALR3Q96L12 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.99□□□□□ -1.45
CALR3Q96L12 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.99□□□□□ -1.45
CALR3Q96L12 RN7SKP250-201ENST00000363924 321 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 RNU6-593P-201ENST00000364716 112 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CALR3Q96L12 SNORA22B-201ENST00000383876 138 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 RNU6-128P-201ENST00000383976 107 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 MIR191-201ENST00000384873 92 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 AL391417.1-201ENST00000404100 426 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 RNA5SP431-201ENST00000410312 120 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 ATG3P1-201ENST00000419507 911 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.99□□□□□ -1.45
CALR3Q96L12 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.99□□□□□ -1.45
CALR3Q96L12 AC007679.3-201ENST00000434035 414 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 NDUFB4P8-201ENST00000435351 367 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.99□□□□□ -1.45
CALR3Q96L12 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.99□□□□□ -1.45
CALR3Q96L12 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.99□□□□□ -1.45
CALR3Q96L12 CYCSP24-201ENST00000445119 316 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.99□□□□□ -1.45
CALR3Q96L12 AC104136.1-201ENST00000512969 394 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 SNORA31.3-201ENST00000516029 96 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 RN7SKP70-201ENST00000516655 271 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.99□□□□□ -1.45
CALR3Q96L12 HMGN2P36-201ENST00000529541 409 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.99□□□□□ -1.45
CALR3Q96L12 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.99□□□□□ -1.45
CALR3Q96L12 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
CALR3Q96L12 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CALR3Q96L12 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.99□□□□□ -1.45
CALR3Q96L12 MIR4660-201ENST00000583549 74 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.99□□□□□ -1.45
CALR3Q96L12 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.99□□□□□ -1.45
CALR3Q96L12 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.99□□□□□ -1.45
CALR3Q96L12 AC010378.1-201ENST00000619270 362 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 AC098657.3-201ENST00000620434 263 ntBASIC5.99□□□□□ -1.45
CALR3Q96L12 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CALR3Q96L12 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.99□□□□□ -1.45
CALR3Q96L12 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CALR3Q96L12 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CALR3Q96L12 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CALR3Q96L12 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
CALR3Q96L12 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
CALR3Q96L12 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CALR3Q96L12 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.99□□□□□ -1.45
CALR3Q96L12 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CALR3Q96L12 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CALR3Q96L12 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CALR3Q96L12 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CALR3Q96L12 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CALR3Q96L12 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CALR3Q96L12 AL445189.1-201ENST00000405722 338 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 RNA5SP487-201ENST00000410186 122 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 RN7SKP86-201ENST00000410454 332 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 AC119751.6-201ENST00000416712 186 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 PNKDP1-201ENST00000435914 430 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 AC073465.2-201ENST00000440938 498 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.98□□□□□ -1.45
CALR3Q96L12 PPIAP27-201ENST00000453800 265 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 AC023194.2-201ENST00000465398 406 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
CALR3Q96L12 GMPSP1-201ENST00000514075 579 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 AC021678.3-201ENST00000517893 476 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.98□□□□□ -1.45
CALR3Q96L12 IGKV3D-25-201ENST00000519599 235 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 AP000648.1-201ENST00000529682 397 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.98□□□□□ -1.45
CALR3Q96L12 AC079600.1-201ENST00000550326 297 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.98□□□□□ -1.45
CALR3Q96L12 AC008737.2-201ENST00000599446 118 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 XIAPP1-201ENST00000603162 600 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 AL031320.1-201ENST00000604177 357 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 AC124916.2-201ENST00000604416 224 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.98□□□□□ -1.45
CALR3Q96L12 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.98□□□□□ -1.45
CALR3Q96L12 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CALR3Q96L12 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CALR3Q96L12 AC022418.1-201ENST00000624118 445 ntBASIC5.98□□□□□ -1.45
CALR3Q96L12 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.98□□□□□ -1.45
CALR3Q96L12 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms