Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 MED14P1-201ENST00000430517 648 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 KATNBL1P3-201ENST00000443475 909 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC080014.1-201ENST00000496877 1201 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC006390.1-201ENST00000508068 283 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC006499.6-201ENST00000511169 607 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC024589.1-201ENST00000512207 263 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AF131216.2-201ENST00000512316 564 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 RNA5SP315-201ENST00000516340 116 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 RNA5SP312-201ENST00000517068 116 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 RNU6-1073P-201ENST00000517182 106 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 IFITM8P-201ENST00000522529 394 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 COX6CP8-201ENST00000522620 226 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC105233.3-201ENST00000531125 744 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 VN1R85P-201ENST00000601587 426 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AL451044.1-201ENST00000604867 238 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AL109618.2-201ENST00000605527 211 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC090186.1-201ENST00000605991 572 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 RNU4-89P-201ENST00000607443 133 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC024941.1-201ENST00000612250 334 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 CR381572.1-201ENST00000625098 102 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AL365440.1-201ENST00000436135 2167 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC004925.1-201ENST00000624256 2706 ntBASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SH3KBP1Q96B97 AC091152.2-201ENST00000591628 2569 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 SNORD116-9-201ENST00000384000 95 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 SNORD116-3-201ENST00000384287 95 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 SNORD116-7-201ENST00000384404 95 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 SNORD116-5-201ENST00000384462 95 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 RNU1-13P-201ENST00000384499 162 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC025750.1-201ENST00000399891 379 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC092447.6-201ENST00000414578 210 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 SNORA71B-202ENST00000439232 272 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AL512286.1-201ENST00000439244 400 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 SDCBPP1-201ENST00000440192 890 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 RNA5SP246-201ENST00000458909 119 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 RNU7-170P-201ENST00000459303 61 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 RPL23AP55-201ENST00000498163 452 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC093824.1-201ENST00000508796 343 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC093809.1-201ENST00000509155 340 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 RN7SKP244-201ENST00000516513 307 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC092851.1-201ENST00000535964 478 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 MIR544B-201ENST00000582372 78 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AP001004.1-201ENST00000582468 324 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC245008.1-201ENST00000608123 476 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 Z69908.1-201ENST00000622603 247 ntBASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SH3KBP1Q96B97 AC006927.3-201ENST00000638789 384 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms