Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RNA5SP315-201ENST00000516340 116 ntBASIC3.42□□□□□ -1.86
PTP4A1Q93096 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.42□□□□□ -1.86
PTP4A1Q93096 RNA5SP312-201ENST00000517068 116 ntBASIC3.42□□□□□ -1.86
PTP4A1Q93096 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.42□□□□□ -1.86
PTP4A1Q93096 OR6C7P-201ENST00000547875 934 ntBASIC3.42□□□□□ -1.86
PTP4A1Q93096 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.42□□□□□ -1.86
PTP4A1Q93096 AC007224.1-201ENST00000564410 144 ntBASIC3.42□□□□□ -1.86
PTP4A1Q93096 AC105224.1-201ENST00000587055 421 ntBASIC3.42□□□□□ -1.86
PTP4A1Q93096 AC022916.3-201ENST00000592961 742 ntBASIC3.42□□□□□ -1.86
PTP4A1Q93096 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.42□□□□□ -1.86
PTP4A1Q93096 AC006270.3-201ENST00000605967 1036 ntBASIC3.42□□□□□ -1.86
PTP4A1Q93096 AP000254.1-201ENST00000609934 520 ntBASIC3.42□□□□□ -1.86
PTP4A1Q93096 AC079684.1-201ENST00000621405 437 ntBASIC3.42□□□□□ -1.86
PTP4A1Q93096 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.42□□□□□ -1.86
PTP4A1Q93096 AL159972.1-201ENST00000625150 448 ntBASIC3.42□□□□□ -1.86
PTP4A1Q93096 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.42□□□□□ -1.86
PTP4A1Q93096 MIR7153-201ENST00000637758 57 ntBASIC3.42□□□□□ -1.86
PTP4A1Q93096 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTP4A1Q93096 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PTP4A1Q93096 FAM35BP-202ENST00000497389 3337 ntBASIC3.42□□□□□ -1.86
PTP4A1Q93096 AC011460.1-201ENST00000636268 1834 ntBASIC3.42□□□□□ -1.86
PTP4A1Q93096 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PTP4A1Q93096 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.42□□□□□ -1.86
PTP4A1Q93096 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PTP4A1Q93096 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTP4A1Q93096 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTP4A1Q93096 SPRR2C-201ENST00000290702 219 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 RNU5A-1-201ENST00000362698 116 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTP4A1Q93096 RPL21P65-201ENST00000406094 466 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 RPS3AP24-201ENST00000407896 734 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 RNU4-6P-201ENST00000410804 122 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 Z97055.1-201ENST00000419730 712 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 ATP5F1P1-201ENST00000433775 569 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 NDUFB4P6-201ENST00000436819 366 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 OR10R1P-201ENST00000441524 1141 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 AC108729.1-201ENST00000487812 947 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 RAC1P2-201ENST00000511164 579 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 AC010374.2-201ENST00000512933 535 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 AC093677.1-201ENST00000514414 678 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 RNY4P37-201ENST00000516225 96 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 RNU6-528P-201ENST00000516926 100 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 AC002550.2-201ENST00000621246 394 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 AL161637.1-201ENST00000622380 412 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 AP003122.6-201ENST00000623831 495 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 SNORA50A-202ENST00000629536 136 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 AL022578.1-201ENST00000439330 1433 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PTP4A1Q93096 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.41□□□□□ -1.86
PTP4A1Q93096 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PTP4A1Q93096 TPTE2P4-201ENST00000258589 1605 ntBASIC3.41□□□□□ -1.86
PTP4A1Q93096 MTND5P24-201ENST00000438892 1767 ntBASIC3.4□□□□□ -1.86
PTP4A1Q93096 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.4□□□□□ -1.86
PTP4A1Q93096 DDX43P2-201ENST00000604753 1354 ntBASIC3.4□□□□□ -1.86
PTP4A1Q93096 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PTP4A1Q93096 AC233263.6-201ENST00000631132 1963 ntBASIC3.4□□□□□ -1.86
PTP4A1Q93096 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.4□□□□□ -1.86
PTP4A1Q93096 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PTP4A1Q93096 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PTP4A1Q93096 RNU4-92P-201ENST00000363783 136 ntBASIC3.4□□□□□ -1.87
PTP4A1Q93096 Y_RNA.234-201ENST00000364409 97 ntBASIC3.4□□□□□ -1.87
PTP4A1Q93096 RNU6-359P-201ENST00000365466 108 ntBASIC3.4□□□□□ -1.87
PTP4A1Q93096 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PTP4A1Q93096 RNU1-13P-201ENST00000384499 162 ntBASIC3.4□□□□□ -1.87
PTP4A1Q93096 SAR1AP2-201ENST00000392696 594 ntBASIC3.4□□□□□ -1.87
PTP4A1Q93096 RNU4-22P-201ENST00000411058 166 ntBASIC3.4□□□□□ -1.87
PTP4A1Q93096 AC234781.2-201ENST00000426370 994 ntBASIC3.4□□□□□ -1.87
PTP4A1Q93096 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.4□□□□□ -1.87
PTP4A1Q93096 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.4□□□□□ -1.87
PTP4A1Q93096 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.4□□□□□ -1.87
PTP4A1Q93096 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.4□□□□□ -1.87
PTP4A1Q93096 SDR42E1P3-201ENST00000438345 502 ntBASIC3.4□□□□□ -1.87
PTP4A1Q93096 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.4□□□□□ -1.87
PTP4A1Q93096 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.4□□□□□ -1.87
PTP4A1Q93096 RPL21P134-201ENST00000453468 483 ntBASIC3.4□□□□□ -1.87
PTP4A1Q93096 MTND1P9-201ENST00000453775 944 ntBASIC3.4□□□□□ -1.87
PTP4A1Q93096 AC104308.1-201ENST00000454621 333 ntBASIC3.4□□□□□ -1.87
PTP4A1Q93096 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.4□□□□□ -1.87
PTP4A1Q93096 AL359385.1-201ENST00000456509 365 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms