Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPRUQ92729 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPRUQ92729 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PTPRUQ92729 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPRUQ92729 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPRUQ92729 AC068620.3-201ENST00000602749 560 ntBASIC3.82□□□□□ -1.8
PTPRUQ92729 AC098826.3-201ENST00000603823 466 ntBASIC3.82□□□□□ -1.8
PTPRUQ92729 AC005014.3-201ENST00000605985 190 ntBASIC3.82□□□□□ -1.8
PTPRUQ92729 AC092628.2-201ENST00000622492 339 ntBASIC3.82□□□□□ -1.8
PTPRUQ92729 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPRUQ92729 AL138960.2-201ENST00000625145 535 ntBASIC3.82□□□□□ -1.8
PTPRUQ92729 AC107081.3-201ENST00000612715 2034 ntBASIC3.82□□□□□ -1.8
PTPRUQ92729 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPRUQ92729 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPRUQ92729 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPRUQ92729 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPRUQ92729 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PTPRUQ92729 RNU6-468P-201ENST00000384003 109 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 RNU6-207P-201ENST00000384137 107 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 MIR518C-201ENST00000384822 101 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 MIR764-201ENST00000390811 85 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 AC004987.3-201ENST00000413879 771 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 AL159169.1-201ENST00000421119 127 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPRUQ92729 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPRUQ92729 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPRUQ92729 HMGB1P45-201ENST00000435986 653 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 OR5H5P-201ENST00000503164 928 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 RNA5SP320-201ENST00000516263 124 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 RNA5SP282-201ENST00000516355 108 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPRUQ92729 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPRUQ92729 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPRUQ92729 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPRUQ92729 AC006518.2-201ENST00000542513 940 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPRUQ92729 AC104072.1-201ENST00000568817 668 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 TMF1P1-201ENST00000576058 373 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 RN7SL622P-201ENST00000585292 275 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.81□□□□□ -1.8
PTPRUQ92729 AC124016.2-201ENST00000610058 665 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 AC006111.3-201ENST00000622137 383 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 AC092608.2-201ENST00000624427 218 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPRUQ92729 AC006927.2-201ENST00000639256 389 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
PTPRUQ92729 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPRUQ92729 AC025263.3-201ENST00000622965 1396 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPRUQ92729 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPRUQ92729 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.81□□□□□ -1.8
PTPRUQ92729 MIR504-201ENST00000385065 83 ntBASIC3.8□□□□□ -1.8
PTPRUQ92729 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTPRUQ92729 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.8□□□□□ -1.8
PTPRUQ92729 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPRUQ92729 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.8□□□□□ -1.8
PTPRUQ92729 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPRUQ92729 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPRUQ92729 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPRUQ92729 AC007424.1-203ENST00000554613 687 ntBASIC3.8□□□□□ -1.8
PTPRUQ92729 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPRUQ92729 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPRUQ92729 MIR3908-201ENST00000579798 126 ntBASIC3.8□□□□□ -1.8
PTPRUQ92729 AC006116.7-201ENST00000590141 756 ntBASIC3.8□□□□□ -1.8
PTPRUQ92729 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPRUQ92729 AC022079.2-201ENST00000619739 566 ntBASIC3.8□□□□□ -1.8
PTPRUQ92729 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPRUQ92729 AC009039.2-201ENST00000624524 529 ntBASIC3.8□□□□□ -1.8
PTPRUQ92729 MIR6715B-201ENST00000637172 77 ntBASIC3.8□□□□□ -1.8
PTPRUQ92729 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPRUQ92729 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPRUQ92729 AC016716.1-201ENST00000265882 708 ntBASIC3.79□□□□□ -1.8
PTPRUQ92729 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPRUQ92729 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPRUQ92729 RPL31P12-201ENST00000422587 358 ntBASIC3.79□□□□□ -1.8
PTPRUQ92729 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPRUQ92729 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPRUQ92729 AL513043.1-201ENST00000439124 535 ntBASIC3.79□□□□□ -1.8
PTPRUQ92729 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPRUQ92729 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPRUQ92729 CDC42P1-201ENST00000456658 548 ntBASIC3.79□□□□□ -1.8
PTPRUQ92729 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPRUQ92729 NIPA2P2-201ENST00000496376 1083 ntBASIC3.79□□□□□ -1.8
PTPRUQ92729 RNU6-488P-201ENST00000515918 99 ntBASIC3.79□□□□□ -1.8
PTPRUQ92729 RPL7P20-201ENST00000520308 745 ntBASIC3.79□□□□□ -1.8
PTPRUQ92729 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPRUQ92729 ATP5F1P5-201ENST00000526403 760 ntBASIC3.79□□□□□ -1.8
PTPRUQ92729 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPRUQ92729 AC068339.2-201ENST00000534395 618 ntBASIC3.79□□□□□ -1.8
PTPRUQ92729 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPRUQ92729 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPRUQ92729 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPRUQ92729 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTPRUQ92729 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPRUQ92729 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPRUQ92729 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPRUQ92729 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPRUQ92729 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PTPRUQ92729 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTPRUQ92729 RNU1-35P-201ENST00000362782 153 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms